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Os10g0463600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.04 (0.0258) R2 : 0.673
β1 : -0.923 (0.0951) R2dD : 0.0712 R2D : 0.0251
β2 : 2.6 (0.0886) R2dC : 1.17 R2C : 0.266
β3 : 1.62 (0.101) R2dE : 0.362 R2E : -0.549
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.215 (0.0556) R2dN8 : 0.0155 R2N8 : -0.015
σ : 0.481
deviance : 106.66
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C
peak time of C : 3.28
E
wheather : temperature
threshold : 1.498
memory length : 141
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.42
open length of G : 18.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
91.42 0.449 9.12 -1.57 2.6 1.87 -0.643 -4.48 -0.437 3.67 12.19 233 1.41 19.1
104.73 0.477 9.09 -1.07 2.78 1.9 0.95 -- -0.343 3.52 9.441 203 1.77 18.5
91.97 0.447 9.11 -1.47 2.59 1.85 -- -3.77 -0.413 3.67 12.18 225 1.4 19.2
106.66 0.481 9.04 -0.923 2.6 1.62 -- -- -0.215 3.28 1.498 141 2.42 18.3
283.3 0.784 9.18 -1.9 -- 1.17 -- -3.34 -0.473 -- 14.71 2709 0.939 20.4
147.09 0.569 9 -0.708 1.75 -- 1.07 -- -0.0812 4.47 -- -- -- --
150.13 0.574 9.01 -0.715 1.76 -- -- -- -0.0868 4.52 -- -- -- --
161.52 0.592 9.09 -1.92 -- 3.26 -- -- -0.706 -- -32.63 2442 12.9 15.1
128.43 0.528 9.03 -- 2.49 1.47 -- -- -0.118 3.3 -1.341 155 2.15 18.3
315.21 0.83 9.02 -0.647 -- -- -- -- -0.0405 -- -- -- -- --
163.62 0.598 8.99 -- 1.74 -- -- -- -0.00717 4.53 -- -- -- --
145.66 0.562 9.06 -- -- 1.98 -- -- -0.0936 -- -387.2 2408 13.2 15.5
326.26 0.843 9 -- -- -- -- -- 0.0312 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.30 temperature 10.0 270 > th dose dependent rect. 1 19
3 92.49 temperature 10.0 270 > th dose dependent rect. 24 21
18 97.00 temperature 10.0 10 > th dose dependent rect. 3 19
26 97.68 radiation 1.0 270 < th dose dependent rect. 5 21
29 97.71 temperature 20.0 270 > th dose independent rect. 1 18
42 99.17 humidity 70.0 10 > th dose dependent rect. 10 17
52 99.75 humidity 70.0 10 > th dose dependent rect. 8 19
61 100.60 radiation 1.0 270 < th dose independent rect. 5 21
73 101.45 radiation 1.0 270 < th dose independent rect. 6 19
199 105.60 humidity 50.0 270 > th dose dependent rect. 6 19
219 106.07 humidity 80.0 30 > th dose independent rect. 11 16
220 106.07 temperature 30.0 90 < th dose dependent rect. 7 20
227 106.16 humidity 80.0 270 > th dose independent rect. 10 15
303 107.71 humidity 80.0 270 > th dose independent rect. 7 18
344 108.24 precipitation 0.1 90 < th dose independent rect. 3 18
345 108.24 precipitation 0.1 90 < th dose dependent rect. 3 18
382 108.68 precipitation 0.1 270 < th dose independent rect. 1 18
384 108.68 precipitation 0.1 270 < th dose dependent rect. 1 18
417 109.10 temperature 10.0 270 > th dose dependent rect. 9 11
485 109.68 precipitation 0.1 270 < th dose independent rect. 15 14
486 109.68 precipitation 0.1 270 < th dose dependent rect. 15 14
526 110.04 humidity 70.0 270 > th dose independent rect. 19 6
537 110.15 atmosphere 1010.0 90 < th dose independent rect. 3 18
541 110.20 precipitation 0.1 270 < th dose independent rect. 24 21
542 110.20 precipitation 0.1 270 < th dose dependent rect. 24 21
574 110.61 humidity 50.0 43200 > th dose independent rect. 22 6
596 110.77 humidity 50.0 270 > th dose independent rect. 6 19
635 111.14 humidity 50.0 270 > th dose dependent rect. 19 6
637 111.16 wind 9.0 270 < th dose independent rect. 19 6
642 111.19 temperature 10.0 270 > th dose independent rect. 19 6
643 111.19 temperature 30.0 270 < th dose independent rect. 19 6
644 111.19 humidity 50.0 270 > th dose independent rect. 19 6
645 111.19 atmosphere 995.0 270 > th dose independent rect. 19 6
646 111.19 radiation 1.0 270 < th dose independent rect. 19 6
652 111.19 atmosphere 1015.0 270 < th dose independent rect. 1 18
653 111.19 radiation 1.0 270 < th dose dependent rect. 19 6
662 111.23 precipitation 0.1 90 < th dose independent rect. 21 6
663 111.23 precipitation 0.1 90 < th dose dependent rect. 21 6
671 111.29 wind 9.0 90 < th dose independent rect. 21 6
672 111.30 temperature 10.0 90 > th dose independent rect. 21 6
673 111.30 temperature 30.0 90 < th dose independent rect. 21 6
674 111.30 humidity 50.0 90 > th dose independent rect. 21 6
677 111.30 atmosphere 995.0 90 > th dose independent rect. 21 6
678 111.30 radiation 1.0 90 < th dose independent rect. 21 6
685 111.30 radiation 1.0 90 < th dose dependent rect. 21 6
692 111.31 humidity 80.0 270 < th dose independent rect. 10 9
694 111.32 humidity 80.0 270 < th dose independent rect. 13 6
701 111.42 atmosphere 995.0 90 > th dose independent rect. 3 18
707 111.50 atmosphere 995.0 270 > th dose independent rect. 1 18
713 111.53 precipitation 0.1 270 < th dose independent rect. 19 6
714 111.53 precipitation 0.1 270 < th dose dependent rect. 19 6
718 111.55 temperature 10.0 720 > th dose dependent rect. 16 21
720 111.59 humidity 50.0 90 > th dose dependent rect. 21 6
721 111.61 wind 9.0 270 < th dose independent rect. 5 10
730 111.68 temperature 10.0 270 > th dose independent rect. 5 10
731 111.68 atmosphere 1015.0 270 < th dose independent rect. 5 10
732 111.68 temperature 10.0 270 > th dose independent rect. 15 14
745 111.79 temperature 10.0 270 > th dose dependent rect. 13 23
754 111.85 temperature 15.0 270 > th dose dependent rect. 13 7
758 111.87 humidity 50.0 270 > th dose dependent rect. 17 8
766 111.91 radiation 40.0 270 < th dose independent rect. 15 14
790 112.15 wind 9.0 90 < th dose independent rect. 3 18
838 112.38 temperature 20.0 270 > th dose independent rect. 10 10
851 112.49 wind 1.0 270 > th dose independent rect. 19 6
860 112.57 wind 9.0 270 < th dose independent rect. 1 18
870 112.65 wind 7.0 43200 > th dose independent rect. 20 1
883 112.74 radiation 10.0 14400 > th dose independent rect. 5 1
906 112.81 precipitation 0.1 270 < th dose independent rect. 5 10
909 112.81 precipitation 0.1 270 < th dose dependent rect. 5 10
954 113.06 atmosphere 995.0 270 > th dose independent rect. 5 10
963 113.13 precipitation 0.1 270 < th dose independent rect. 21 3
965 113.13 precipitation 0.1 270 < th dose dependent rect. 21 3
970 113.15 wind 9.0 43200 > th dose dependent rect. 20 3
999 113.35 wind 7.0 270 < th dose independent rect. 21 3