BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0463600 Os10g0463600|Os10g0463600
         (495 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24255.1  | chr3:8789471-8793208 FORWARD LENGTH=747             96   6e-20
ATMG01250.1  | chrM:310514-310882 FORWARD LENGTH=123               59   7e-09
AT4G29090.1  | chr4:14333528-14335255 FORWARD LENGTH=576           50   2e-06

>AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747
          Length = 746

 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 144/344 (41%), Gaps = 58/344 (16%)

Query: 168 EQNLSEVLENFNGQRGNFPITYLGLPLTPGHIKRIHLQPVMDKLQSRLAGWKGKLIQQSG 227
           + + +++L +F    G  P+ YLGLPL    +      P+++K++ R+  W  + +  +G
Sbjct: 6   DNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAG 65

Query: 228 RKTLVTSVLSSIPTYFLTALKPPKQFLTDMNKIRKKFLWAGDQEISGGKCKVNWKKVCSP 287
           R  L++SV+ S+  ++++A + P   + +++ I   FLW+G  E++  K KV W  VC+P
Sbjct: 66  RLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSG-PELNTKKAKVAWSDVCTP 124

Query: 288 IKMGGLGVLDLDKFARALRLRWLWFEWECPDKPWVGTTPPCDELDEQIFAAA-TKVTIGN 346
              GGLG+       R+L+       W       +G+      L  +  A+   K  I N
Sbjct: 125 KDEGGLGI-------RSLKEANKGSFWSISGNTTLGSWMWKKILKHRALASGFVKHDIHN 177

Query: 347 GRKAKFWTSNW---------IGHQPL--------KYLAPALFNHSKGKQRLVQDALTN-D 388
           G    FW  NW          GH+            +A A+ NH   + R   D L   +
Sbjct: 178 GSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAVVNHRPRRHR--HDTLLRIE 235

Query: 389 KWIEDIRHELSMPLIREFFAVFRLIWDNETNLEEGVEDTIIWRWTNTGK-----YTAKSA 443
             I ++RH+                      L  G EDT+  RW   G      +  K  
Sbjct: 236 DVIAEVRHQ---------------------GLTSG-EDTV--RWKGNGDIFKPCFNTKET 271

Query: 444 YLAQFVGREDSRAATLIWKIWAPSKCKNFAWLVLQNRIWTSDRL 487
           + A    +        +W   A  K    AW+ ++NR+ T DR+
Sbjct: 272 WAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRM 315



>ATMG01250.1 | chrM:310514-310882 FORWARD LENGTH=123
          Length = 122

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 19/107 (17%)

Query: 60  LLNGIAGEPTTHRRGLRQGDPLSPYLFILAIDPIQRLLNKATQEGLLSPL--SNRAARFK 117
           ++NG      T  RGLRQGDPLSPYLFIL  + +  L  +A ++G L  +  SN + R  
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 118 ISLYADDAA-------------IFINSIR----NDVNNLISILKFFG 147
             L+ADD +             IF  S+R    N VN+ +S L F G
Sbjct: 73  HLLFADDTSSARWIPLAAQIWPIFFLSMRLFQGNPVNHPMSNLYFLG 119



>AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576
          Length = 575

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 103/296 (34%), Gaps = 51/296 (17%)

Query: 238 SIPTYFLTALKPPKQFLTDMNKIRKKFLWAGDQEISGGKCKVNWKKVCSPIKMGGLGVLD 297
           ++PTY +     PK     +  +   F W   QE  G   K  W  +      GG+G  D
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKA-WDHLSCYKAEGGIGFKD 60

Query: 298 LDKFARALRLRWLW------------------FEWECPDKPWVGTTPP----CDELDEQI 335
           ++ F  AL  + +W                  F    P    +G+ P          ++I
Sbjct: 61  IEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEI 120

Query: 336 FAAATKVTIGNGRKAKFWTSNWIGHQP------LKYLAPALFNHSKGKQRLVQDAL--TN 387
                +  +GNG     W   W+  +P      ++ + P  +       + V D +  + 
Sbjct: 121 LRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILK-VSDLIDESG 179

Query: 388 DKWIEDIRHELSMPLIREFFAVFRLIWDNETNLEEGVEDTIIWRWTNTGKYTAKSAY--L 445
            +W +D+   L   + R+     R            + D+  W +T++G YT KS Y  L
Sbjct: 180 REWRKDVIEMLFPEVERKLIGELR-------PGGRRILDSYTWDYTSSGDYTVKSGYWVL 232

Query: 446 AQFVGREDSRAATL----------IWKIWAPSKCKNFAWLVLQNRIWTSDRLQLRQ 491
            Q + +  S               IWK     K ++F W  L N +  +  L  R 
Sbjct: 233 TQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRH 288



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.137    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,345,290
Number of extensions: 476792
Number of successful extensions: 1024
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1020
Number of HSP's successfully gapped: 3
Length of query: 495
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 392
Effective length of database: 8,282,721
Effective search space: 3246826632
Effective search space used: 3246826632
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)