Os10g0461100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Keratin, type II cytoskeletal 1 (Cytokeratin 1) (K1) (CK 1) (67 kDa cytokeratin) (Hair alpha protein).
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Os10g0461100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Keratin, type II cytoskeletal 1 (Cytokeratin 1) (K1) (CK 1) (67 kDa cytokeratin) (Hair alpha protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.36 | 0.316 | 12.7 | -0.489 | 1.23 | 0.381 | 0.513 | 3.17 | -0.473 | 22.6 | 9.961 | 1237 | -- | -- |
| 50.09 | 0.33 | 12.7 | -1.3 | 1.16 | 0.459 | 0.7 | -- | -0.672 | 23 | 24.3 | 1894 | -- | -- |
| 45.59 | 0.314 | 12.7 | -0.487 | 1.18 | 0.398 | -- | 3.52 | -0.468 | 22.7 | 10.19 | 976 | -- | -- |
| 50.22 | 0.33 | 12.8 | -1.27 | 1.1 | 0.61 | -- | -- | -0.667 | 22.9 | 24.29 | 953 | -- | -- |
| 118.32 | 0.507 | 12.7 | -0.715 | -- | 1.28 | -- | 3.61 | -0.602 | -- | -10.64 | 827 | -- | -- |
| 56.41 | 0.352 | 12.7 | -1.03 | 1.27 | -- | 0.772 | -- | -0.579 | 22.8 | -- | -- | -- | -- |
| 58.9 | 0.359 | 12.7 | -1.07 | 1.26 | -- | -- | -- | -0.581 | 22.7 | -- | -- | -- | -- |
| 111.6 | 0.492 | 12.7 | -1.36 | -- | 1.26 | -- | -- | -0.71 | -- | 24.3 | 863 | -- | -- |
| 87.04 | 0.435 | 12.7 | -- | 1.23 | 0.22 | -- | -- | -0.434 | 22.7 | 28.7 | 2413 | -- | -- |
| 157.32 | 0.586 | 12.7 | -1.04 | -- | -- | -- | -- | -0.574 | -- | -- | -- | -- | -- |
| 88.85 | 0.441 | 12.7 | -- | 1.25 | -- | -- | -- | -0.463 | 22.7 | -- | -- | -- | -- |
| 157.26 | 0.584 | 12.7 | -- | -- | 0.973 | -- | -- | -0.526 | -- | 24.5 | 842 | -- | -- |
| 185.9 | 0.636 | 12.7 | -- | -- | -- | -- | -- | -0.459 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 3 | 41.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 57 | 43.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 66 | 43.52 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 15 |
| 83 | 43.84 | wind | 7 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 96 | 43.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 111 | 44.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 112 | 44.07 | wind | 7 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 116 | 44.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 17 |
| 125 | 44.15 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 134 | 44.19 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 157 | 44.30 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 167 | 44.34 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 169 | 44.36 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 21 |
| 188 | 44.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 14 |
| 192 | 44.45 | temperature | 10 | 270 | > th | dose dependent | sin | 4 | NA |
| 196 | 44.47 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 203 | 44.51 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 210 | 44.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 13 |
| 258 | 44.64 | temperature | 10 | 1440 | > th | dose dependent | sin | 1 | NA |
| 318 | 44.75 | wind | 1 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 319 | 44.75 | wind | 9 | 43200 | > th | dose dependent | sin | 12 | NA |
| 336 | 44.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 374 | 44.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 382 | 44.85 | wind | 5 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 402 | 44.89 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 410 | 44.90 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 4 |
| 436 | 44.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 437 | 44.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 439 | 44.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 494 | 45.01 | wind | 9 | 43200 | > th | dose independent | sin | 10 | NA |
| 503 | 45.01 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 22 |
| 598 | 45.13 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 606 | 45.14 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 659 | 45.19 | temperature | 30 | 1440 | < th | dose dependent | sin | 1 | NA |
| 665 | 45.20 | wind | 9 | 43200 | < th | dose independent | sin | 10 | NA |
| 668 | 45.20 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 886 | 45.39 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 962 | 45.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 20 |