Os10g0460900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os10g0460900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.62 | 0.417 | 12.4 | 1.06 | 1.92 | -0.249 | -0.783 | -2.53 | -0.489 | 20.9 | 48.41 | 8519 | -- | -- |
| 89.65 | 0.441 | 12.4 | 0.829 | 1.9 | -0.307 | -0.486 | -- | -0.522 | 21 | 51.41 | 25248 | -- | -- |
| 80.38 | 0.418 | 12.4 | 1.09 | 1.92 | -0.269 | -- | -2.59 | -0.492 | 20.9 | 49.79 | 8736 | -- | -- |
| 91 | 0.444 | 12.4 | 0.853 | 1.91 | -0.357 | -- | -- | -0.516 | 20.9 | 50.57 | 24826 | -- | -- |
| 281.94 | 0.782 | 12.4 | 1.21 | -- | -0.872 | -- | -2.55 | -0.64 | -- | 64.08 | 9458 | -- | -- |
| 91.36 | 0.448 | 12.4 | 0.721 | 1.92 | -- | -0.716 | -- | -0.474 | 20.9 | -- | -- | -- | -- |
| 93.1 | 0.452 | 12.4 | 0.745 | 1.92 | -- | -- | -- | -0.474 | 20.9 | -- | -- | -- | -- |
| 293.07 | 0.797 | 12.4 | 0.941 | -- | -0.87 | -- | -- | -0.628 | -- | 57.82 | 9453 | -- | -- |
| 104.84 | 0.477 | 12.4 | -- | 1.92 | 0.478 | -- | -- | -0.513 | 21 | 40 | 47520 | -- | -- |
| 304.72 | 0.816 | 12.3 | 0.746 | -- | -- | -- | -- | -0.487 | -- | -- | -- | -- | -- |
| 107.73 | 0.486 | 12.4 | -- | 1.92 | -- | -- | -- | -0.557 | 21 | -- | -- | -- | -- |
| 305.3 | 0.814 | 12.4 | -- | -- | -0.923 | -- | -- | -0.877 | -- | 67 | 6495 | -- | -- |
| 319.41 | 0.834 | 12.3 | -- | -- | -- | -- | -- | -0.57 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.63 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 3 | 74.98 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 4 | 75.19 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 7 |
| 6 | 75.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 8 | 75.48 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 9 | 75.49 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 6 | 17 |
| 15 | 76.04 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 19 | 76.36 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 8 |
| 21 | 76.40 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 31 | 76.53 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 9 |
| 32 | 76.54 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 6 |
| 35 | 76.56 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 36 | 76.57 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 46 | 76.60 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 86 | 76.73 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 96 | 76.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 12 |
| 111 | 76.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 115 | 76.81 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 128 | 76.83 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 144 | 76.89 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 164 | 76.96 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 173 | 76.99 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 195 | 77.07 | radiation | 10.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 213 | 77.12 | temperature | 20.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 214 | 77.13 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 243 | 77.24 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 249 | 77.25 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 256 | 77.27 | temperature | 20.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 257 | 77.27 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 270 | 77.29 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 274 | 77.30 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 278 | 77.31 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 283 | 77.32 | radiation | 1.0 | 90 | < th | dose independent | sin | 7 | NA |
| 287 | 77.32 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 16 |
| 299 | 77.36 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 314 | 77.42 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 322 | 77.43 | wind | 5.0 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 329 | 77.45 | wind | 5.0 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 338 | 77.49 | radiation | 1.0 | 90 | > th | dose independent | sin | 7 | NA |
| 341 | 77.49 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 350 | 77.52 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 361 | 77.56 | wind | 5.0 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 388 | 77.62 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 396 | 77.65 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 397 | 77.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 17 |
| 417 | 77.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 427 | 77.74 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 428 | 77.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 436 | 77.77 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 437 | 77.77 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 446 | 77.78 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 450 | 77.79 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 494 | 77.93 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 498 | 77.95 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 507 | 77.97 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 514 | 78.00 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 531 | 78.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 534 | 78.03 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 6 | 17 |
| 552 | 78.06 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 554 | 78.06 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 15 |
| 556 | 78.07 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 571 | 78.12 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 1 | 4 |
| 575 | 78.12 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 10 |
| 589 | 78.15 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 6 |
| 592 | 78.15 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 604 | 78.18 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 15 |
| 608 | 78.19 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 8 |
| 623 | 78.21 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 624 | 78.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 627 | 78.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 13 |
| 630 | 78.23 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 647 | 78.26 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 658 | 78.27 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 665 | 78.28 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 15 |
| 666 | 78.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 4 |
| 677 | 78.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 684 | 78.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 686 | 78.31 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 8 | 15 |
| 688 | 78.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 690 | 78.32 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 694 | 78.32 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 17 |
| 717 | 78.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 718 | 78.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 719 | 78.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 722 | 78.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 723 | 78.35 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 728 | 78.35 | temperature | 10.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 729 | 78.35 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 730 | 78.35 | humidity | 50.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 733 | 78.35 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 734 | 78.35 | radiation | 20.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 737 | 78.35 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 742 | 78.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 748 | 78.35 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 795 | 78.42 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 813 | 78.45 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 831 | 78.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 882 | 78.57 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 5 |
| 901 | 78.59 | wind | 5.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 909 | 78.60 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 918 | 78.61 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 927 | 78.62 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 930 | 78.63 | humidity | 90.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 952 | 78.66 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 956 | 78.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 9 |
| 960 | 78.67 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 978 | 78.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |