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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0453900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Eggshell protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.15 (0.015) R2 : 0.00325
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0384 (0.0315) R2dN8 : 0.0042 R2N8 : 0.00325
σ : 0.282
deviance : 36.45
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.73 0.273 3.18 0.107 0.15 -0.591 -0.158 -2.98 -0.0537 6.78 7 797 -- --
35.09 0.278 3.15 0.0566 0.143 -0.0664 -0.351 -- -0.0343 6 7.43 459 -- --
33.74 0.271 3.18 0.106 0.152 -0.6 -- -3.02 -0.0524 7.47 7 796 -- --
35.28 0.277 3.15 0.0371 0.132 0.112 -- -- -0.0381 6.32 8.701 775 -- --
34.92 0.275 3.18 0.0946 -- -0.507 -- -2.92 -0.0544 -- 6.999 801 -- --
35.12 0.278 3.15 0.0499 0.14 -- -0.326 -- -0.0371 6.11 -- -- -- --
35.31 0.278 3.15 0.0478 0.143 -- -- -- -0.0354 7.04 -- -- -- --
36.02 0.28 3.15 0.0218 -- 0.127 -- -- -0.0346 -- 5.4 235 -- --
35.11 0.276 3.15 -- 0.145 0.129 -- -- -0.0417 6.77 10.84 1085 -- --
36.38 0.282 3.15 0.0506 -- -- -- -- -0.0328 -- -- -- -- --
35.37 0.278 3.15 -- 0.143 -- -- -- -0.0407 7.02 -- -- -- --
35.89 0.279 3.15 -- -- 0.115 -- -- -0.0273 -- 4.3 369 -- --
36.45 0.282 3.15 -- -- -- -- -- -0.0384 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.07 radiation 1.0 14400 < th dose dependent rect. 3 1
2 30.21 atmosphere 1005.0 30 > th dose independent rect. 2 1
3 30.21 atmosphere 1005.0 30 > th dose dependent rect. 2 1
4 30.22 temperature 20.0 30 > th dose dependent rect. 2 1
8 30.26 temperature 20.0 30 > th dose independent rect. 2 1
10 30.29 wind 3.0 30 < th dose independent rect. 2 1
11 30.29 wind 3.0 30 < th dose dependent rect. 2 1
18 30.33 atmosphere 1000.0 30 > th dose independent rect. 3 23
19 30.34 humidity 50.0 30 > th dose dependent rect. 2 1
23 30.35 temperature 10.0 30 > th dose independent rect. 2 1
25 30.35 temperature 30.0 30 < th dose independent rect. 2 1
26 30.35 humidity 50.0 30 > th dose independent rect. 2 1
32 30.35 atmosphere 1010.0 30 < th dose independent rect. 2 1
34 30.35 radiation 1.0 30 < th dose independent rect. 2 1
39 30.35 precipitation 0.1 30 < th dose independent rect. 2 1
40 30.35 temperature 10.0 30 > th dose independent rect. 3 23
43 30.35 radiation 1.0 30 < th dose dependent rect. 2 1
48 30.35 precipitation 0.1 30 < th dose dependent rect. 2 1
65 30.57 wind 9.0 1440 < th dose independent rect. 3 1
66 30.57 temperature 10.0 1440 > th dose independent rect. 3 1
69 30.57 temperature 30.0 1440 < th dose independent rect. 3 1
73 30.57 humidity 50.0 1440 > th dose independent rect. 3 1
82 30.57 atmosphere 995.0 1440 > th dose independent rect. 3 1
83 30.57 radiation 1.0 1440 < th dose independent rect. 3 1
103 30.57 temperature 10.0 1440 > th dose independent rect. 4 23
106 30.57 temperature 30.0 30 < th dose dependent rect. 2 1
107 30.57 atmosphere 1015.0 30 < th dose dependent rect. 2 1
116 30.63 wind 1.0 30 > th dose independent rect. 2 1
140 31.01 atmosphere 1005.0 10 > th dose dependent rect. 2 4
178 31.21 precipitation 0.1 30 < th dose independent rect. 3 23
179 31.21 precipitation 0.1 30 < th dose dependent rect. 3 23
185 31.47 wind 9.0 30 < th dose independent rect. 3 23
194 31.73 humidity 90.0 90 < th dose independent rect. 2 4
228 32.27 humidity 50.0 30 > th dose independent rect. 3 23
259 32.36 humidity 90.0 270 < th dose dependent rect. 1 5
260 32.39 humidity 90.0 270 < th dose dependent rect. 3 2
276 32.49 atmosphere 1005.0 10 > th dose independent rect. 2 4
315 32.63 humidity 90.0 30 < th dose dependent rect. 3 3
317 32.64 atmosphere 995.0 720 > th dose independent rect. 23 16
353 32.82 temperature 30.0 30 < th dose independent rect. 3 23
355 32.82 humidity 90.0 1440 < th dose dependent rect. 1 3
366 32.85 wind 3.0 30 < th dose dependent rect. 2 4
370 32.86 wind 3.0 30 < th dose dependent rect. 2 6
384 32.89 radiation 10.0 30 < th dose dependent rect. 3 23
388 32.91 wind 9.0 30 < th dose dependent rect. 3 23
389 32.92 wind 1.0 30 < th dose independent rect. 23 4
390 32.93 atmosphere 1000.0 10 > th dose independent rect. 16 10
391 32.93 wind 7.0 720 < th dose independent rect. 3 17
397 32.94 precipitation 0.1 720 < th dose independent rect. 15 8
398 32.94 radiation 10.0 30 < th dose independent rect. 3 23
402 32.94 precipitation 0.1 720 < th dose dependent rect. 15 8
409 32.95 wind 5.0 14400 < th dose dependent rect. 10 2
430 33.00 wind 3.0 14400 > th dose independent rect. 10 1
444 33.02 atmosphere 1000.0 10 > th dose independent rect. 2 14
445 33.02 precipitation 0.1 720 < th dose independent rect. 11 16
452 33.02 precipitation 0.1 720 < th dose dependent rect. 11 16
456 33.04 wind 7.0 720 < th dose independent rect. 7 23
460 33.05 wind 1.0 30 < th dose independent rect. 11 16
467 33.06 wind 1.0 30 < th dose independent rect. 13 14
469 33.06 wind 1.0 14400 > th dose dependent rect. 10 2
478 33.07 radiation 40.0 10 < th dose dependent rect. 14 12
487 33.09 radiation 30.0 10 < th dose dependent rect. 16 10
502 33.12 radiation 10.0 10 < th dose independent rect. 16 10
510 33.13 wind 9.0 10 < th dose independent rect. 16 10
512 33.13 precipitation 0.1 10 < th dose independent rect. 2 14
516 33.13 precipitation 0.1 10 < th dose dependent rect. 2 14
518 33.14 wind 3.0 30 < th dose independent rect. 2 6
522 33.14 humidity 60.0 10 > th dose independent rect. 14 12
523 33.14 atmosphere 1000.0 10 > th dose independent rect. 14 12
537 33.16 temperature 10.0 10 > th dose independent rect. 16 10
540 33.16 temperature 10.0 10 > th dose independent rect. 2 14
542 33.16 atmosphere 1015.0 10 < th dose independent rect. 2 14
552 33.17 humidity 50.0 10 > th dose independent rect. 16 10
562 33.18 wind 3.0 14400 < th dose independent rect. 10 1
565 33.19 humidity 80.0 1440 > th dose independent rect. 24 3
569 33.19 radiation 10.0 10 < th dose independent rect. 14 12
573 33.19 atmosphere 995.0 720 > th dose independent rect. 15 23
581 33.20 temperature 10.0 720 > th dose independent rect. 15 8
583 33.20 precipitation 0.1 10 < th dose independent rect. 16 10
584 33.20 radiation 40.0 30 < th dose independent rect. 14 12
585 33.20 wind 7.0 720 < th dose independent rect. 15 15
586 33.20 temperature 10.0 720 > th dose independent rect. 23 16
591 33.20 precipitation 0.1 10 < th dose dependent rect. 16 10
595 33.21 wind 5.0 1440 < th dose independent rect. 4 1
615 33.22 wind 9.0 10 < th dose independent rect. 2 14
631 33.23 wind 3.0 10 < th dose independent rect. 2 4
634 33.23 temperature 10.0 1440 > th dose independent rect. 17 10
638 33.23 radiation 30.0 1440 < th dose independent rect. 17 10
644 33.23 temperature 10.0 1440 > th dose independent rect. 3 14
653 33.24 wind 3.0 90 > th dose independent rect. 22 13
657 33.24 temperature 10.0 30 > th dose dependent rect. 2 4
710 33.26 wind 5.0 14400 < th dose independent rect. 9 6
713 33.26 temperature 10.0 720 > th dose independent rect. 3 8
714 33.26 atmosphere 995.0 720 > th dose independent rect. 3 8
716 33.26 temperature 10.0 720 > th dose independent rect. 11 16
741 33.27 humidity 50.0 720 > th dose independent rect. 3 8
748 33.27 wind 3.0 14400 > th dose dependent rect. 9 6
760 33.28 wind 1.0 90 > th dose dependent rect. 21 14
766 33.29 wind 3.0 270 < th dose independent rect. 23 6
768 33.29 wind 7.0 720 < th dose independent rect. 1 22
776 33.29 humidity 80.0 14400 < th dose dependent rect. 23 10
780 33.30 wind 9.0 720 < th dose independent rect. 3 8
781 33.30 temperature 30.0 10 < th dose independent rect. 16 10
782 33.30 atmosphere 1000.0 10 > th dose independent rect. 2 12
788 33.30 wind 1.0 30 < th dose dependent rect. 23 4
794 33.31 atmosphere 995.0 720 > th dose independent rect. 7 8
795 33.31 wind 1.0 30 > th dose independent rect. 16 10
809 33.32 wind 7.0 720 < th dose independent sin 13 NA
814 33.32 wind 5.0 14400 > th dose independent rect. 9 6
833 33.33 humidity 50.0 10 > th dose independent rect. 2 14
834 33.33 atmosphere 1000.0 720 > th dose independent rect. 21 14
835 33.33 wind 7.0 720 < th dose independent rect. 10 23
848 33.34 atmosphere 995.0 1440 > th dose independent rect. 3 12
874 33.35 wind 1.0 30 < th dose dependent rect. 21 6
879 33.36 wind 5.0 1440 > th dose independent rect. 4 1
898 33.37 wind 7.0 720 < th dose independent sin 0 NA
913 33.37 wind 5.0 1440 > th dose dependent rect. 2 6
921 33.38 atmosphere 995.0 720 > th dose independent rect. 14 1
925 33.38 atmosphere 995.0 270 > th dose independent rect. 10 11
929 33.38 wind 5.0 1440 > th dose dependent rect. 5 1
937 33.38 wind 1.0 30 < th dose dependent rect. 13 14
947 33.39 wind 5.0 1440 < th dose independent rect. 2 6
948 33.39 temperature 30.0 4320 < th dose independent rect. 3 6
952 33.39 atmosphere 995.0 720 > th dose independent rect. 15 8
954 33.39 wind 7.0 720 < th dose independent rect. 17 12
956 33.39 atmosphere 1000.0 10 > th dose independent rect. 8 18
978 33.40 wind 9.0 720 < th dose independent rect. 15 8
982 33.40 atmosphere 1010.0 30 < th dose independent rect. 3 23
989 33.41 wind 3.0 90 < th dose independent sin 7 NA