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Os10g0449400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.0163) R2 : 0.413
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.02 (0.0591) R2dE : 0.404 R2E : 0.268
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.318 (0.0351) R2dN8 : 0.145 R2N8 : 0.00972
σ : 0.304
deviance : 42.74
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 20.3
memory length : 415
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.69 0.273 13.5 -0.22 0.372 1.17 -0.874 0.155 -0.353 21.1 19.38 9 -- --
33.64 0.27 13.5 -0.246 0.376 1.18 -0.895 -- -0.359 21.2 19.45 5 -- --
35.74 0.281 13.5 -0.115 0.387 1.24 -- 0.718 -0.339 22 19.13 8 -- --
36.12 0.28 13.5 -0.229 0.388 1.24 -- -- -0.371 22 19.89 4 -- --
41.92 0.302 13.4 -0.145 -- 1.05 -- 0.295 -0.315 -- 19.6 227 -- --
58.14 0.357 13.4 0.0221 0.458 -- -0.806 -- -0.158 18.2 -- -- -- --
59.49 0.361 13.4 0.0334 0.46 -- -- -- -0.16 17.7 -- -- -- --
41.42 0.3 13.5 -0.236 -- 1.08 -- -- -0.358 -- 19.87 495 -- --
37.42 0.285 13.5 -- 0.376 1.16 -- -- -0.345 21.7 19.9 4 -- --
70.45 0.392 13.4 0.0189 -- -- -- -- -0.171 -- -- -- -- --
59.52 0.361 13.4 -- 0.459 -- -- -- -0.163 17.7 -- -- -- --
42.74 0.304 13.4 -- -- 1.02 -- -- -0.318 -- 20.3 415 -- --
70.46 0.392 13.4 -- -- -- -- -- -0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.57 temperature 30 10 < th dose dependent rect. 1 23
2 33.35 temperature 30 90 < th dose dependent rect. 23 23
4 33.49 temperature 30 10 < th dose dependent rect. 9 23
5 33.65 temperature 20 10 > th dose dependent rect. 15 23
7 33.79 temperature 20 10 > th dose dependent no NA NA
8 33.83 temperature 30 10 < th dose dependent rect. 13 23
9 33.84 temperature 30 10 < th dose dependent rect. 19 23
10 33.86 temperature 30 10 < th dose dependent rect. 11 23
11 33.96 temperature 30 10 < th dose dependent no NA NA
12 33.98 temperature 20 90 > th dose dependent rect. 15 23
15 34.16 temperature 20 10 > th dose dependent rect. 2 23
22 34.30 temperature 30 10 < th dose dependent rect. 15 23
23 34.34 temperature 20 720 > th dose dependent rect. 20 20
24 34.35 temperature 25 1440 > th dose independent rect. 5 18
27 34.37 temperature 30 10 < th dose dependent rect. 7 23
29 34.39 temperature 25 1440 < th dose independent rect. 5 18
31 34.41 temperature 25 1440 > th dose independent rect. 3 20
36 34.43 temperature 10 720 > th dose dependent rect. 20 22
41 34.45 temperature 20 10 > th dose dependent rect. 21 23
57 34.51 temperature 20 10 > th dose dependent sin 7 NA
60 34.52 temperature 30 10 < th dose dependent rect. 23 23
68 34.57 temperature 30 10 < th dose dependent rect. 17 23
85 34.65 temperature 20 10 > th dose dependent rect. 5 23
127 34.83 temperature 30 10 < th dose dependent rect. 21 23
130 34.85 temperature 25 1440 > th dose independent rect. 16 23
131 34.85 temperature 30 720 < th dose dependent rect. 8 20
134 34.85 temperature 10 270 > th dose dependent rect. 2 23
145 34.88 temperature 20 1440 > th dose dependent rect. 10 21
146 34.88 temperature 20 1440 > th dose dependent rect. 17 21
159 34.91 temperature 25 1440 > th dose independent no NA NA
169 34.93 temperature 25 1440 > th dose independent rect. 11 23
197 34.98 temperature 20 1440 > th dose dependent no NA NA
200 34.98 temperature 20 1440 > th dose dependent rect. 23 22
204 34.99 temperature 20 1440 > th dose dependent rect. 3 23
213 35.00 temperature 20 1440 > th dose dependent rect. 13 23
274 35.08 temperature 25 1440 > th dose independent sin 18 NA
283 35.08 temperature 20 10 > th dose dependent rect. 23 23
339 35.15 temperature 10 720 > th dose dependent rect. 4 20
342 35.16 temperature 20 1440 > th dose dependent sin 16 NA
411 35.26 temperature 25 1440 < th dose independent rect. 16 23
420 35.27 temperature 20 1440 > th dose dependent sin 5 NA
447 35.32 temperature 25 1440 < th dose independent no NA NA
453 35.32 temperature 30 10 < th dose dependent rect. 3 23
461 35.34 temperature 25 1440 < th dose independent rect. 11 23
478 35.35 temperature 25 1440 < th dose independent rect. 13 23
486 35.36 temperature 25 1440 > th dose independent rect. 15 7
490 35.36 temperature 20 10 > th dose dependent rect. 17 23
497 35.39 temperature 25 1440 < th dose independent sin 18 NA
542 35.45 temperature 20 1440 > th dose dependent rect. 18 3
543 35.45 temperature 20 1440 > th dose dependent rect. 15 10
567 35.50 temperature 25 1440 > th dose independent rect. 11 13
615 35.56 temperature 25 1440 < th dose independent rect. 15 7
634 35.58 temperature 20 4320 > th dose dependent rect. 21 1
635 35.58 temperature 30 1440 < th dose dependent rect. 18 1
720 35.69 temperature 25 1440 < th dose independent rect. 11 13
747 35.72 temperature 20 4320 > th dose dependent rect. 20 4
775 35.76 temperature 25 1440 < th dose independent rect. 5 9
819 35.83 temperature 25 1440 > th dose independent rect. 5 9
850 35.86 temperature 30 1440 < th dose dependent rect. 4 18