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Os10g0447400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.85 (0.0238) R2 : 0.133
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.419 (0.0501) R2dN8 : 0.172 R2N8 : 0.133
σ : 0.448
deviance : 92.22
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.87 0.375 9.85 0.404 0.523 -0.845 1.25 0.0578 0.409 0.404 78.92 1139 -- --
63.87 0.372 9.85 0.4 0.524 -0.839 1.26 -- 0.409 0.413 79 1139 -- --
69.54 0.388 9.85 0.402 0.541 -0.898 -- 0.897 0.407 0.32 79.26 1063 -- --
70.65 0.391 9.86 0.337 0.511 -0.799 -- -- 0.408 0.562 79.48 1139 -- --
78.09 0.412 9.85 0.246 -- -0.64 -- -0.656 0.414 -- 84 1671 -- --
78.51 0.415 9.84 0.252 0.335 -- 1.13 -- 0.444 0.499 -- -- -- --
83.98 0.429 9.85 0.208 0.334 -- -- -- 0.437 0.818 -- -- -- --
78.69 0.413 9.85 0.311 -- -0.682 -- -- 0.42 -- 83 1670 -- --
73.57 0.399 9.86 -- 0.504 -0.733 -- -- 0.381 0.594 81.14 1135 -- --
90.94 0.446 9.84 0.22 -- -- -- -- 0.444 -- -- -- -- --
85.12 0.432 9.85 -- 0.337 -- -- -- 0.414 0.846 -- -- -- --
81.09 0.419 9.85 -- -- -0.657 -- -- 0.393 -- 85 1671 -- --
92.22 0.448 9.85 -- -- -- -- -- 0.419 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.83 humidity 80 1440 < th dose dependent rect. 18 1
4 64.41 humidity 70 1440 > th dose independent rect. 17 18
5 64.45 humidity 70 1440 > th dose independent rect. 17 2
8 64.49 humidity 60 14400 < th dose independent rect. 16 2
10 64.51 humidity 80 1440 < th dose dependent rect. 17 17
20 64.74 humidity 60 14400 > th dose independent rect. 16 2
29 64.86 temperature 10 270 > th dose dependent rect. 2 15
32 64.88 temperature 20 90 > th dose independent rect. 19 9
40 64.98 radiation 10 1440 > th dose independent rect. 17 13
42 65.01 humidity 70 1440 > th dose independent sin 11 NA
43 65.01 humidity 70 14400 < th dose dependent rect. 17 1
44 65.02 temperature 20 10 > th dose independent rect. 20 9
49 65.10 radiation 10 1440 > th dose independent rect. 17 1
68 65.19 humidity 70 1440 > th dose independent rect. 17 12
73 65.21 humidity 70 1440 > th dose independent rect. 17 8
80 65.23 humidity 70 1440 > th dose independent rect. 17 4
87 65.25 humidity 60 14400 < th dose independent rect. 15 17
94 65.31 humidity 60 14400 < th dose independent rect. 15 7
105 65.31 humidity 70 1440 < th dose independent rect. 16 20
130 65.40 humidity 80 1440 < th dose dependent sin 12 NA
150 65.50 humidity 80 1440 < th dose dependent rect. 15 10
158 65.52 humidity 60 14400 < th dose independent sin 13 NA
168 65.53 humidity 70 270 > th dose independent rect. 6 20
186 65.56 temperature 30 270 < th dose dependent rect. 6 8
211 65.63 humidity 60 14400 > th dose independent rect. 15 17
223 65.66 humidity 60 14400 > th dose independent sin 12 NA
232 65.69 humidity 60 14400 > th dose independent rect. 14 8
265 65.73 radiation 10 1440 > th dose dependent rect. 17 13
274 65.76 humidity 80 1440 < th dose independent rect. 7 7
280 65.79 radiation 10 1440 > th dose dependent rect. 17 1
299 65.81 humidity 70 1440 > th dose independent rect. 9 15
310 65.82 humidity 70 1440 > th dose independent rect. 9 11
323 65.84 humidity 80 1440 < th dose dependent rect. 7 18
356 65.86 humidity 80 1440 < th dose dependent rect. 7 14
370 65.86 humidity 80 1440 < th dose dependent rect. 23 22
377 65.87 humidity 80 1440 < th dose dependent no NA NA
387 65.87 humidity 80 1440 < th dose dependent rect. 1 20
434 65.90 humidity 70 14400 < th dose dependent rect. 16 18
436 65.90 humidity 80 1440 < th dose dependent rect. 11 23
462 65.98 wind 3 14400 < th dose independent rect. 3 1
481 65.99 radiation 10 1440 < th dose independent rect. 17 1
482 65.99 temperature 25 270 < th dose independent rect. 6 7
490 65.99 wind 1 14400 > th dose dependent rect. 3 1
502 66.03 wind 3 14400 > th dose independent rect. 3 1
572 66.14 humidity 70 1440 > th dose independent no NA NA
582 66.14 humidity 70 1440 > th dose independent rect. 3 19
585 66.14 humidity 70 1440 > th dose independent rect. 1 20
594 66.14 humidity 70 1440 > th dose independent rect. 23 21
613 66.14 wind 7 14400 < th dose dependent rect. 3 2
647 66.16 humidity 70 1440 < th dose independent sin 11 NA
667 66.18 humidity 80 1440 < th dose independent rect. 19 1
687 66.21 humidity 70 1440 < th dose independent rect. 16 2
720 66.25 humidity 70 1440 < th dose independent rect. 9 11
765 66.29 humidity 50 1440 > th dose dependent rect. 7 14
797 66.34 humidity 70 1440 < th dose independent rect. 15 5
815 66.35 radiation 10 1440 < th dose independent rect. 17 11
828 66.36 humidity 50 1440 > th dose dependent rect. 18 1
856 66.38 humidity 70 14400 < th dose dependent sin 11 NA
865 66.40 humidity 80 1440 > th dose independent rect. 7 7
873 66.40 humidity 60 1440 > th dose dependent rect. 10 3
920 66.43 humidity 70 14400 < th dose dependent rect. 14 5
926 66.44 radiation 10 1440 < th dose independent rect. 17 9
932 66.44 humidity 60 270 > th dose dependent rect. 6 20
971 66.48 radiation 10 1440 < th dose independent rect. 17 7
982 66.48 radiation 20 270 < th dose dependent rect. 6 20