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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0437900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : HSP20-like chaperone domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.24 (0.0248) R2 : 0.391
β1 : -1.42 (0.0909) R2dD : 0.34 R2D : 0.222
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.516 (0.053) R2dN8 : 0.17 R2N8 : 0.051
σ : 0.466
deviance : 99.38
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.55 0.445 4.24 -1.51 0.214 -0.396 0.324 0.442 -0.522 4.78 1.2 15 -- --
89.42 0.44 4.22 -1.51 0.175 -0.288 0.275 -- -0.479 4.56 1.7 13 -- --
89.45 0.44 4.23 -1.54 0.171 -0.347 -- 0.219 -0.501 5.29 1.544 15 -- --
89.5 0.441 4.23 -1.54 0.168 -0.304 -- -- -0.496 5.19 1.751 13 -- --
90.56 0.443 4.23 -1.57 -- -0.409 -- 0.227 -0.493 -- 1.7 15 -- --
93.09 0.452 4.23 -1.44 0.334 -- 0.338 -- -0.523 4.69 -- -- -- --
93.39 0.453 4.23 -1.44 0.336 -- -- -- -0.525 4.78 -- -- -- --
90.52 0.443 4.23 -1.57 -- -0.383 -- -- -0.481 -- 1.836 12 -- --
146.94 0.565 4.19 -- 0.253 -0.18 -- -- -0.357 5.01 1.116 9 -- --
99.38 0.466 4.24 -1.42 -- -- -- -- -0.516 -- -- -- -- --
147.85 0.569 4.2 -- 0.31 -- -- -- -0.365 4.91 -- -- -- --
149.88 0.57 4.2 -- -- -0.311 -- -- -0.349 -- 1.111 14 -- --
152.93 0.577 4.2 -- -- -- -- -- -0.358 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.62 temperature 20.0 30 > th dose dependent rect. 2 1
4 85.75 temperature 20.0 30 > th dose independent rect. 2 1
5 85.76 wind 3.0 30 < th dose dependent rect. 2 1
6 85.76 atmosphere 1005.0 30 > th dose dependent rect. 2 1
8 85.79 wind 3.0 30 < th dose independent rect. 2 1
9 85.80 humidity 90.0 30 > th dose independent rect. 2 1
11 85.82 humidity 80.0 30 > th dose dependent rect. 2 1
17 85.87 humidity 50.0 30 > th dose dependent rect. 2 1
19 85.88 atmosphere 1005.0 30 > th dose independent rect. 2 1
24 85.90 temperature 10.0 30 > th dose independent rect. 2 1
26 85.90 temperature 30.0 30 < th dose independent rect. 2 1
27 85.90 humidity 50.0 30 > th dose independent rect. 2 1
30 85.90 atmosphere 995.0 30 > th dose independent rect. 2 1
31 85.90 atmosphere 1010.0 30 < th dose independent rect. 2 1
33 85.90 radiation 1.0 30 < th dose independent rect. 2 1
38 85.90 precipitation 0.1 30 < th dose independent rect. 2 1
39 85.90 temperature 10.0 30 > th dose independent rect. 3 23
40 85.90 radiation 1.0 30 < th dose dependent rect. 2 1
45 85.90 precipitation 0.1 30 < th dose dependent rect. 2 1
49 86.00 atmosphere 1015.0 30 < th dose dependent rect. 2 1
59 86.28 temperature 30.0 30 < th dose dependent rect. 2 1
62 86.36 wind 1.0 30 > th dose independent rect. 2 1
100 86.74 atmosphere 1015.0 1440 < th dose independent rect. 3 1
101 86.76 temperature 15.0 1440 > th dose independent rect. 3 1
105 86.90 wind 1.0 30 < th dose dependent rect. 17 10
107 86.96 wind 1.0 30 < th dose dependent rect. 21 6
114 87.01 wind 1.0 30 < th dose dependent rect. 23 4
117 87.12 atmosphere 995.0 30 > th dose independent rect. 3 23
118 87.13 wind 9.0 30 < th dose independent rect. 3 23
120 87.24 wind 1.0 30 < th dose dependent rect. 11 16
134 87.82 wind 1.0 30 < th dose independent rect. 17 10
136 87.87 temperature 10.0 30 > th dose dependent rect. 3 23
137 87.88 wind 1.0 30 < th dose independent rect. 21 6
141 87.90 humidity 50.0 43200 > th dose independent rect. 3 1
145 87.97 wind 1.0 30 < th dose independent rect. 14 13
169 88.25 wind 7.0 720 > th dose dependent rect. 22 12
174 88.39 wind 9.0 720 > th dose independent rect. 22 12
175 88.41 wind 7.0 720 > th dose dependent rect. 19 15
178 88.50 wind 9.0 4320 < th dose independent rect. 3 1
181 88.56 atmosphere 1005.0 90 > th dose dependent rect. 1 14
187 88.63 humidity 90.0 270 > th dose dependent rect. 5 2
189 88.65 atmosphere 1005.0 10 > th dose dependent rect. 1 15
194 88.68 atmosphere 1010.0 90 < th dose independent rect. 3 22
204 88.72 precipitation 0.1 30 < th dose independent rect. 3 23
205 88.72 precipitation 0.1 30 < th dose dependent rect. 3 23
206 88.73 radiation 1.0 14400 < th dose dependent rect. 3 1
208 88.74 wind 7.0 720 > th dose dependent sin 9 NA
214 88.77 atmosphere 1005.0 90 > th dose dependent rect. 1 17
228 88.82 temperature 30.0 1440 < th dose independent rect. 3 1
232 88.82 humidity 50.0 1440 > th dose independent rect. 3 1
241 88.82 atmosphere 995.0 1440 > th dose independent rect. 3 1
242 88.82 radiation 1.0 1440 < th dose independent rect. 3 1
262 88.82 temperature 10.0 1440 > th dose independent rect. 4 23
265 88.82 radiation 1.0 1440 < th dose dependent rect. 3 1
277 88.83 atmosphere 1005.0 30 > th dose independent rect. 1 14
294 88.87 temperature 10.0 270 > th dose dependent rect. 3 20
296 88.90 atmosphere 1005.0 720 > th dose dependent rect. 1 2
301 88.93 temperature 15.0 270 > th dose dependent rect. 4 18
311 88.98 temperature 15.0 270 > th dose dependent rect. 6 16
314 88.99 wind 7.0 720 > th dose dependent rect. 1 7
317 89.00 atmosphere 1010.0 90 < th dose independent rect. 3 8
328 89.04 wind 7.0 720 > th dose independent rect. 1 7
330 89.05 wind 9.0 720 > th dose independent rect. 1 9
337 89.07 humidity 90.0 270 > th dose independent rect. 6 1
342 89.08 wind 1.0 10 < th dose independent rect. 6 21
358 89.10 atmosphere 1010.0 720 > th dose dependent rect. 24 9
387 89.16 wind 7.0 720 > th dose dependent rect. 3 5
404 89.19 wind 7.0 720 > th dose independent sin 8 NA
405 89.19 wind 7.0 720 > th dose independent rect. 3 5
406 89.19 wind 5.0 90 > th dose independent rect. 10 5
417 89.21 temperature 15.0 4320 > th dose independent rect. 13 3
430 89.23 temperature 15.0 720 > th dose independent rect. 3 8
438 89.24 temperature 30.0 270 < th dose dependent rect. 9 6
439 89.24 temperature 30.0 270 < th dose dependent rect. 8 8
444 89.25 precipitation 0.1 14400 < th dose independent rect. 23 1
447 89.25 precipitation 0.1 14400 < th dose dependent rect. 23 1
450 89.25 wind 3.0 90 > th dose dependent rect. 10 5
470 89.28 wind 3.0 10 < th dose dependent sin 12 NA
480 89.30 temperature 30.0 30 < th dose dependent rect. 11 7
486 89.31 wind 9.0 1440 > th dose independent rect. 11 1
487 89.31 wind 9.0 1440 > th dose dependent rect. 11 1
490 89.31 temperature 20.0 90 > th dose dependent rect. 9 16
503 89.33 temperature 15.0 4320 > th dose independent rect. 9 8
504 89.33 temperature 30.0 720 < th dose dependent rect. 9 3
517 89.35 wind 5.0 270 > th dose independent rect. 11 1
521 89.36 radiation 1.0 720 < th dose independent rect. 8 1
529 89.36 radiation 1.0 720 < th dose dependent rect. 8 1
531 89.36 temperature 30.0 720 < th dose dependent rect. 6 6
539 89.37 wind 7.0 270 > th dose dependent rect. 7 1
546 89.38 wind 7.0 270 > th dose independent rect. 7 1
578 89.41 temperature 25.0 30 > th dose independent rect. 9 20
586 89.42 wind 1.0 10 > th dose independent rect. 15 20
607 89.44 atmosphere 1005.0 30 < th dose independent rect. 1 10
615 89.44 wind 1.0 30 > th dose independent rect. 3 23
627 89.45 wind 9.0 270 > th dose dependent rect. 9 1
646 89.47 precipitation 0.1 14400 > th dose independent rect. 23 1
647 89.47 temperature 15.0 4320 > th dose independent rect. 12 7
650 89.47 precipitation 0.1 14400 > th dose dependent rect. 23 1
657 89.48 temperature 15.0 4320 < th dose independent rect. 10 3
659 89.48 wind 1.0 10 > th dose independent rect. 24 11
664 89.48 temperature 10.0 720 > th dose dependent rect. 4 11
669 89.49 temperature 30.0 90 < th dose dependent rect. 11 4
670 89.49 wind 3.0 30 > th dose dependent rect. 11 8
679 89.50 temperature 15.0 4320 > th dose independent rect. 9 10
681 89.50 temperature 30.0 90 < th dose independent rect. 1 14
704 89.51 wind 9.0 1440 > th dose dependent rect. 21 20
712 89.52 temperature 30.0 10 < th dose dependent rect. 11 4
720 89.53 wind 9.0 1440 < th dose independent rect. 11 1
738 89.54 atmosphere 1015.0 1440 > th dose independent rect. 3 10
742 89.54 temperature 25.0 90 > th dose independent rect. 9 16
744 89.54 atmosphere 1010.0 720 > th dose dependent sin 6 NA
745 89.54 wind 3.0 270 > th dose dependent rect. 11 1
753 89.55 wind 1.0 10 < th dose independent sin 16 NA
754 89.55 precipitation 0.1 1440 > th dose independent rect. 10 1
758 89.55 atmosphere 1015.0 1440 < th dose independent rect. 4 10
761 89.55 precipitation 0.1 1440 > th dose dependent rect. 10 1
772 89.56 temperature 15.0 4320 < th dose independent rect. 10 5
775 89.56 temperature 20.0 1440 < th dose dependent rect. 10 1
795 89.57 wind 9.0 1440 > th dose dependent rect. 9 8
810 89.58 humidity 90.0 90 < th dose independent rect. 2 1
814 89.58 atmosphere 1015.0 1440 < th dose independent rect. 8 6
832 89.58 wind 1.0 30 > th dose dependent rect. 11 11
840 89.59 atmosphere 1015.0 1440 < th dose independent rect. 10 4
846 89.59 temperature 15.0 4320 > th dose independent rect. 7 10
871 89.60 temperature 20.0 1440 < th dose independent rect. 10 1
886 89.60 temperature 25.0 30 < th dose independent rect. 9 20
908 89.61 atmosphere 1015.0 1440 > th dose independent rect. 10 4
930 89.61 wind 3.0 10 < th dose dependent rect. 13 18
958 89.63 wind 7.0 270 < th dose independent sin 9 NA
982 89.63 wind 7.0 270 > th dose dependent rect. 18 22