Os10g0436800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 1,4-benzoquinone reductase.
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Os10g0436800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 1,4-benzoquinone reductase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.79 | 0.703 | 2.94 | 0.185 | 0.12 | 0.247 | 0.295 | 1.78 | -0.0629 | 17.8 | 37.25 | 33 | -- | -- |
| 231.3 | 0.714 | 2.93 | 0.222 | 0.103 | 0.157 | 0.658 | -- | -0.0489 | 14.7 | 38.56 | 26 | -- | -- |
| 223.38 | 0.696 | 2.94 | 0.169 | 0.123 | 0.266 | -- | 1.78 | -0.0592 | 17.6 | 38.41 | 29 | -- | -- |
| 232.02 | 0.709 | 2.93 | 0.244 | 0.117 | 0.25 | -- | -- | -0.0455 | 17.4 | 38.48 | 26 | -- | -- |
| 224.14 | 0.697 | 2.94 | 0.166 | -- | 0.282 | -- | 1.76 | -0.0609 | -- | 38.52 | 29 | -- | -- |
| 232.16 | 0.714 | 2.94 | 0.223 | 0.147 | -- | 0.659 | -- | -0.0523 | 14.5 | -- | -- | -- | -- |
| 233.64 | 0.716 | 2.93 | 0.24 | 0.156 | -- | -- | -- | -0.048 | 15.4 | -- | -- | -- | -- |
| 232.74 | 0.711 | 2.93 | 0.24 | -- | 0.268 | -- | -- | -0.0468 | -- | 38.58 | 26 | -- | -- |
| 233.6 | 0.712 | 2.94 | -- | 0.112 | 0.246 | -- | -- | -0.0715 | 17.4 | 38.49 | 26 | -- | -- |
| 235.01 | 0.716 | 2.93 | 0.234 | -- | -- | -- | -- | -0.0521 | -- | -- | -- | -- | -- |
| 235.16 | 0.717 | 2.94 | -- | 0.151 | -- | -- | -- | -0.0747 | 15.4 | -- | -- | -- | -- |
| 234.27 | 0.713 | 2.94 | -- | -- | 0.261 | -- | -- | -0.075 | -- | 38.5 | 26 | -- | -- |
| 236.45 | 0.718 | 2.94 | -- | -- | -- | -- | -- | -0.078 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.21 | humidity | 60 | 90 | < th | dose dependent | rect. | 12 | 2 |
| 3 | 215.30 | humidity | 50 | 90 | < th | dose independent | rect. | 13 | 1 |
| 123 | 216.04 | humidity | 50 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 217 | 216.50 | humidity | 50 | 10 | < th | dose independent | rect. | 13 | 5 |
| 377 | 218.92 | wind | 1 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 378 | 219.01 | humidity | 50 | 90 | < th | dose dependent | sin | 7 | NA |
| 379 | 219.17 | humidity | 50 | 10 | < th | dose dependent | sin | 13 | NA |
| 383 | 219.69 | wind | 1 | 90 | < th | dose independent | rect. | 8 | 3 |
| 385 | 219.75 | humidity | 50 | 10 | < th | dose independent | sin | 13 | NA |
| 387 | 219.88 | humidity | 60 | 30 | < th | dose independent | rect. | 17 | 1 |
| 391 | 220.20 | humidity | 50 | 10 | > th | dose independent | sin | 13 | NA |
| 392 | 220.39 | humidity | 90 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 395 | 220.64 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 1 |
| 535 | 221.04 | radiation | 40 | 90 | > th | dose independent | rect. | 12 | 22 |
| 635 | 221.71 | humidity | 80 | 90 | < th | dose dependent | rect. | 2 | 5 |
| 640 | 221.99 | humidity | 90 | 10 | < th | dose independent | rect. | 3 | 2 |
| 645 | 222.26 | temperature | 30 | 10 | > th | dose independent | rect. | 13 | 23 |
| 647 | 222.40 | humidity | 50 | 90 | < th | dose independent | sin | 7 | NA |
| 649 | 222.42 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 1 |
| 651 | 222.42 | humidity | 80 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 744 | 223.20 | temperature | 30 | 10 | > th | dose dependent | sin | 10 | NA |
| 750 | 223.36 | radiation | 40 | 90 | > th | dose independent | rect. | 12 | 1 |
| 751 | 223.36 | temperature | 30 | 30 | > th | dose dependent | rect. | 17 | 19 |
| 775 | 223.57 | radiation | 40 | 30 | > th | dose independent | sin | 13 | NA |
| 810 | 223.89 | radiation | 40 | 30 | < th | dose independent | rect. | 5 | 12 |
| 858 | 224.03 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 22 |
| 864 | 224.06 | radiation | 40 | 30 | < th | dose independent | rect. | 18 | 23 |
| 889 | 224.12 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 5 |
| 896 | 224.22 | wind | 7 | 30 | > th | dose independent | rect. | 17 | 1 |
| 903 | 224.32 | temperature | 30 | 10 | > th | dose independent | rect. | 17 | 19 |
| 909 | 224.46 | radiation | 40 | 30 | < th | dose independent | rect. | 5 | 22 |
| 918 | 224.57 | atmosphere | 1010 | 90 | > th | dose independent | rect. | 8 | 1 |
| 919 | 224.57 | atmosphere | 1010 | 10 | > th | dose independent | rect. | 9 | 1 |
| 992 | 224.60 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 5 |