Os10g0416500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb chitinase-1) (TBC-1).
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Os10g0416500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb chitinase-1) (TBC-1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 497.6 | 1.05 | 8.98 | 1.53 | 2.07 | -1.99 | 0.581 | 0.239 | 0.084 | 4.68 | 57 | 1239 | -- | -- |
| 497.57 | 1.04 | 8.98 | 1.52 | 2.07 | -1.97 | 0.596 | -- | 0.0903 | 4.66 | 56.83 | 1224 | -- | -- |
| 498.31 | 1.04 | 8.98 | 1.53 | 2.07 | -2 | -- | 0.328 | 0.0848 | 4.7 | 57 | 1217 | -- | -- |
| 498.43 | 1.04 | 8.98 | 1.52 | 2.08 | -1.96 | -- | -- | 0.0902 | 4.71 | 56.78 | 1217 | -- | -- |
| 557.49 | 1.1 | 8.89 | 1.34 | -- | -2.11 | -- | 0.446 | 0.617 | -- | 73 | 388 | -- | -- |
| 617.46 | 1.16 | 8.9 | 1.12 | 1.91 | -- | 0.0448 | -- | 0.456 | 5.14 | -- | -- | -- | -- |
| 617.47 | 1.16 | 8.9 | 1.12 | 1.91 | -- | -- | -- | 0.456 | 5.15 | -- | -- | -- | -- |
| 558.15 | 1.1 | 8.9 | 1.32 | -- | -2.12 | -- | -- | 0.601 | -- | 73.15 | 388 | -- | -- |
| 557.09 | 1.1 | 9 | -- | 2.08 | -1.71 | -- | -- | -0.0198 | 4.76 | 56 | 1227 | -- | -- |
| 808.56 | 1.33 | 8.92 | 1.19 | -- | -- | -- | -- | 0.504 | -- | -- | -- | -- | -- |
| 650.75 | 1.19 | 8.92 | -- | 1.93 | -- | -- | -- | 0.331 | 5.13 | -- | -- | -- | -- |
| 604.2 | 1.14 | 8.93 | -- | -- | -2.07 | -- | -- | 0.468 | -- | 73 | 388 | -- | -- |
| 846 | 1.36 | 8.95 | -- | -- | -- | -- | -- | 0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 485.36 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 2 | 493.17 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 16 |
| 4 | 494.57 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 6 |
| 5 | 495.25 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 2 |
| 7 | 496.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 15 | 499.88 | humidity | 60 | 720 | > th | dose independent | sin | 12 | NA |
| 16 | 500.12 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 17 | 500.37 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 8 |
| 18 | 500.45 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 19 | 500.63 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 29 | 502.02 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 31 | 502.14 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 45 | 502.30 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 65 | 503.02 | humidity | 60 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 67 | 503.06 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 68 | 503.15 | humidity | 80 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 104 | 504.42 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 142 | 505.81 | humidity | 60 | 1440 | < th | dose dependent | rect. | 13 | 21 |
| 179 | 506.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 212 | 507.14 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 237 | 507.48 | humidity | 60 | 1440 | < th | dose independent | sin | 14 | NA |
| 308 | 508.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 337 | 508.46 | humidity | 70 | 1440 | < th | dose dependent | sin | 14 | NA |
| 458 | 510.88 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 606 | 512.49 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 699 | 513.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 707 | 513.43 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 715 | 513.62 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 745 | 514.03 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 749 | 514.06 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 807 | 514.50 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 818 | 514.62 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 17 |
| 870 | 515.06 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 889 | 515.31 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 915 | 515.48 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 932 | 515.63 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 978 | 515.88 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 7 |