Os10g0410700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SET domain protein 123.
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Os10g0410700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to SET domain protein 123.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.17 | 0.29 | 8.38 | 0.131 | 0.543 | 0.861 | -0.393 | -0.509 | -0.0521 | 1.18 | 21.32 | 4036 | -- | -- |
| 38.58 | 0.289 | 8.37 | 0.247 | 0.545 | 0.918 | -0.411 | -- | -0.0171 | 1.14 | 21.3 | 4065 | -- | -- |
| 38.79 | 0.29 | 8.38 | 0.132 | 0.543 | 0.856 | -- | -0.56 | -0.0533 | 1.1 | 21.34 | 4032 | -- | -- |
| 39.28 | 0.292 | 8.36 | 0.263 | 0.542 | 0.922 | -- | -- | -0.0208 | 1.1 | 21.37 | 4057 | -- | -- |
| 54.8 | 0.345 | 8.35 | 0.431 | -- | 0.861 | -- | -0.138 | 0.0128 | -- | 21.9 | 1056 | -- | -- |
| 58.86 | 0.36 | 8.29 | 0.797 | 0.587 | -- | -0.429 | -- | 0.279 | 1.23 | -- | -- | -- | -- |
| 59.61 | 0.362 | 8.29 | 0.813 | 0.587 | -- | -- | -- | 0.282 | 1.14 | -- | -- | -- | -- |
| 54.87 | 0.345 | 8.34 | 0.552 | -- | 0.776 | -- | -- | 0.0252 | -- | 22.22 | 1063 | -- | -- |
| 40.46 | 0.296 | 8.37 | -- | 0.549 | 1.08 | -- | -- | -0.0856 | 1.16 | 21.3 | 5320 | -- | -- |
| 80.93 | 0.42 | 8.28 | 0.835 | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
| 77.01 | 0.411 | 8.31 | -- | 0.6 | -- | -- | -- | 0.191 | 1.2 | -- | -- | -- | -- |
| 58.33 | 0.356 | 8.37 | -- | -- | 1.1 | -- | -- | -0.0719 | -- | 21.4 | 2550 | -- | -- |
| 99.32 | 0.465 | 8.3 | -- | -- | -- | -- | -- | 0.201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 5 |
| 2 | 37.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 10 | 37.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 25 | 37.76 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 28 | 37.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 49 | 37.82 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 118 | 37.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 129 | 37.96 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 208 | 38.04 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 216 | 38.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 335 | 38.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 401 | 38.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 453 | 38.21 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 496 | 38.24 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 529 | 38.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 577 | 38.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 622 | 38.32 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 3 |