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Os10g0406200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, RING-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0217) R2 : 0.548
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.23 (0.0524) R2dC : 0.548 R2C : 0.548
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0163 (0.0457) R2dN8 : 0.000163 R2N8 : 0.000158
σ : 0.41
deviance : 76.79
__
_____
C
peak time of C : 1.49
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
64.55 0.377 10.9 -0.199 1.18 -0.906 0.171 -1.1 0.024 1.69 6.978 4316 -- --
65.16 0.376 10.9 -0.168 1.21 -0.73 0.198 -- 0.00934 1.75 6.868 4315 -- --
64.66 0.375 10.9 -0.205 1.18 -0.914 -- -1.11 0.0218 1.68 6.9 4315 -- --
65.22 0.376 10.9 -0.163 1.19 -0.732 -- -- 0.00343 1.66 6.925 4315 -- --
143.76 0.558 10.8 -0.127 -- -1.11 -- -1.08 0.0858 -- 7.291 4518 -- --
76.45 0.41 10.9 0.0874 1.23 -- 0.206 -- 0.0264 1.5 -- -- -- --
76.62 0.41 10.9 0.0806 1.23 -- -- -- 0.0253 1.49 -- -- -- --
145.23 0.561 10.9 -0.204 -- -0.99 -- -- 0.0641 -- 7.251 4524 -- --
65.89 0.378 10.9 -- 1.19 -0.662 -- -- 0.0128 1.66 7.039 4312 -- --
169.44 0.608 10.9 0.13 -- -- -- -- 0.0518 -- -- -- -- --
76.79 0.41 10.9 -- 1.23 -- -- -- 0.0163 1.49 -- -- -- --
145.84 0.562 10.9 -- -- -0.896 -- -- 0.0809 -- 7.9 4518 -- --
169.89 0.608 10.9 -- -- -- -- -- 0.0374 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.83 radiation 1.0 90 < th dose dependent sin 7 NA
5 55.00 temperature 20.0 720 > th dose independent rect. 5 2
6 55.31 radiation 40.0 90 < th dose independent rect. 5 6
7 55.46 humidity 60.0 90 > th dose independent rect. 5 6
9 55.70 radiation 1.0 90 < th dose independent sin 7 NA
10 55.76 temperature 15.0 90 > th dose dependent rect. 24 5
12 56.03 temperature 15.0 720 > th dose dependent rect. 5 2
13 56.05 temperature 15.0 270 > th dose dependent rect. 24 3
14 56.10 temperature 15.0 90 > th dose dependent rect. 2 3
15 56.13 radiation 1.0 90 > th dose independent sin 7 NA
17 56.21 wind 3.0 90 < th dose independent rect. 24 5
28 56.50 humidity 50.0 90 > th dose dependent rect. 5 6
29 56.54 wind 7.0 90 < th dose dependent rect. 24 5
31 56.59 wind 3.0 90 < th dose independent rect. 2 3
51 56.86 temperature 15.0 90 > th dose independent rect. 5 6
52 56.88 wind 9.0 90 < th dose independent rect. 5 6
54 56.90 precipitation 0.1 90 < th dose independent rect. 5 6
55 56.90 precipitation 0.1 90 < th dose dependent rect. 5 6
57 56.91 wind 9.0 90 < th dose dependent rect. 15 14
59 56.93 atmosphere 995.0 90 > th dose independent rect. 5 6
60 56.93 atmosphere 1015.0 90 < th dose independent rect. 5 6
61 56.93 temperature 10.0 90 > th dose independent rect. 11 18
62 56.94 precipitation 0.1 90 < th dose independent rect. 11 18
64 56.94 precipitation 0.1 90 < th dose dependent rect. 11 18
66 56.98 radiation 20.0 14400 < th dose independent rect. 3 3
70 57.01 temperature 10.0 90 > th dose dependent rect. 5 6
73 57.08 wind 9.0 90 < th dose independent rect. 11 18
74 57.09 wind 9.0 90 < th dose dependent rect. 11 18
82 57.33 radiation 40.0 90 < th dose dependent rect. 5 6
83 57.35 temperature 15.0 90 > th dose independent rect. 5 21
92 57.50 wind 9.0 90 < th dose dependent rect. 5 6
108 57.84 radiation 20.0 270 < th dose independent rect. 5 2
109 57.84 radiation 1.0 90 < th dose dependent rect. 2 3
110 57.85 precipitation 0.1 90 < th dose independent rect. 2 3
112 57.85 precipitation 0.1 90 < th dose dependent rect. 2 3
114 57.87 temperature 20.0 90 > th dose independent rect. 2 3
115 57.90 humidity 80.0 90 > th dose independent rect. 2 3
117 57.91 radiation 10.0 10 < th dose dependent rect. 2 4
118 57.93 radiation 20.0 14400 < th dose independent rect. 1 5
119 57.95 temperature 30.0 90 < th dose independent rect. 5 6
122 57.99 humidity 50.0 90 > th dose dependent rect. 2 3
123 57.99 radiation 40.0 10 < th dose dependent rect. 6 5
124 58.00 radiation 1.0 90 < th dose independent rect. 2 3
128 58.02 humidity 70.0 270 > th dose independent rect. 5 2
131 58.03 wind 9.0 90 < th dose independent rect. 5 21
134 58.04 temperature 10.0 90 > th dose independent rect. 2 3
136 58.04 temperature 30.0 90 < th dose independent rect. 2 3
137 58.04 humidity 50.0 90 > th dose independent rect. 2 3
140 58.04 atmosphere 995.0 90 > th dose independent rect. 2 3
141 58.04 atmosphere 1010.0 90 < th dose independent rect. 2 3
147 58.04 radiation 10.0 10 < th dose dependent rect. 24 6
151 58.11 temperature 10.0 1440 > th dose independent rect. 6 6
154 58.11 atmosphere 995.0 1440 > th dose independent rect. 6 6
155 58.11 temperature 10.0 1440 > th dose independent rect. 12 18
158 58.11 radiation 30.0 270 < th dose dependent rect. 5 2
162 58.14 wind 5.0 90 < th dose independent rect. 14 15
175 58.24 atmosphere 1005.0 90 > th dose independent rect. 24 5
176 58.27 wind 9.0 1440 < th dose independent rect. 1 5
179 58.27 radiation 40.0 90 < th dose dependent rect. 5 21
181 58.28 humidity 50.0 90 > th dose dependent rect. 23 6
190 58.31 temperature 15.0 270 > th dose independent rect. 3 21
194 58.31 humidity 50.0 90 > th dose dependent rect. 5 8
209 58.32 atmosphere 995.0 90 > th dose independent rect. 11 18
215 58.33 wind 7.0 10 < th dose dependent rect. 24 6
222 58.38 radiation 1.0 90 < th dose dependent rect. 23 7
223 58.39 wind 7.0 270 < th dose independent rect. 5 2
225 58.39 temperature 10.0 270 > th dose independent rect. 5 2
227 58.39 temperature 30.0 270 < th dose independent rect. 5 2
228 58.39 humidity 50.0 270 > th dose independent rect. 5 2
230 58.39 atmosphere 995.0 270 > th dose independent rect. 5 2
231 58.39 atmosphere 1015.0 270 < th dose independent rect. 5 2
233 58.39 precipitation 0.1 270 < th dose independent rect. 5 2
235 58.39 temperature 10.0 270 > th dose independent rect. 7 22
236 58.39 humidity 50.0 270 > th dose dependent rect. 5 2
237 58.39 precipitation 0.1 270 < th dose dependent rect. 5 2
240 58.41 wind 1.0 90 > th dose independent rect. 5 6
242 58.43 wind 9.0 1440 < th dose independent rect. 3 3
243 58.43 temperature 10.0 1440 > th dose independent rect. 3 3
246 58.43 temperature 30.0 1440 < th dose independent rect. 3 3
250 58.43 humidity 50.0 1440 > th dose independent rect. 3 3
259 58.43 atmosphere 995.0 1440 > th dose independent rect. 3 3
260 58.43 radiation 20.0 1440 < th dose independent rect. 3 3
269 58.43 temperature 10.0 1440 > th dose independent rect. 6 21
273 58.48 precipitation 0.1 270 < th dose independent rect. 7 22
274 58.48 precipitation 0.1 270 < th dose dependent rect. 7 22
279 58.52 radiation 30.0 10 < th dose independent rect. 6 5
283 58.53 radiation 1.0 90 < th dose independent rect. 23 7
320 58.63 atmosphere 1000.0 90 > th dose dependent rect. 24 5
347 58.72 atmosphere 995.0 90 > th dose dependent rect. 2 3
355 58.76 wind 3.0 10 < th dose independent rect. 24 6
369 58.79 wind 5.0 90 < th dose independent rect. 11 18
377 58.80 radiation 1.0 90 < th dose dependent rect. 23 12
392 58.86 wind 9.0 270 < th dose dependent rect. 5 2
393 58.86 radiation 20.0 4320 < th dose dependent rect. 3 2
432 58.92 humidity 60.0 90 > th dose independent rect. 5 8
443 58.93 wind 9.0 270 < th dose independent rect. 7 22
467 58.95 temperature 10.0 90 > th dose dependent rect. 5 19
496 59.13 wind 1.0 270 > th dose independent rect. 5 2
497 59.13 atmosphere 1005.0 90 > th dose independent rect. 2 3
498 59.13 radiation 20.0 90 < th dose independent rect. 5 21
500 59.13 radiation 1.0 90 < th dose dependent rect. 1 10
506 59.15 atmosphere 995.0 270 > th dose dependent rect. 5 2
510 59.16 wind 9.0 270 < th dose independent rect. 3 20
513 59.19 atmosphere 1015.0 90 < th dose independent rect. 11 18
529 59.26 radiation 1.0 90 > th dose independent rect. 4 7
549 59.29 atmosphere 1015.0 90 < th dose independent rect. 5 18
553 59.30 humidity 50.0 10 > th dose dependent rect. 6 5
561 59.32 radiation 40.0 10 < th dose dependent rect. 6 20
591 59.44 temperature 10.0 270 > th dose dependent rect. 3 7
593 59.46 temperature 10.0 1440 > th dose independent rect. 1 5
596 59.46 temperature 30.0 1440 < th dose independent rect. 1 5
600 59.46 humidity 50.0 1440 > th dose independent rect. 1 5
609 59.46 atmosphere 995.0 1440 > th dose independent rect. 1 5
610 59.46 radiation 20.0 1440 < th dose independent rect. 1 5
619 59.46 temperature 10.0 1440 > th dose independent rect. 6 19
649 59.58 atmosphere 995.0 90 > th dose independent rect. 5 21
650 59.58 precipitation 0.1 90 < th dose independent rect. 5 21
653 59.58 precipitation 0.1 90 < th dose dependent rect. 5 21
655 59.61 wind 1.0 270 > th dose independent rect. 24 3
661 59.62 radiation 10.0 10 < th dose independent rect. 24 6
665 59.63 atmosphere 1005.0 270 > th dose independent rect. 24 2
708 59.76 temperature 15.0 10 > th dose independent rect. 6 18
717 59.78 radiation 1.0 90 < th dose independent rect. 23 12
750 59.90 humidity 50.0 30 > th dose independent rect. 5 21
784 59.94 radiation 40.0 90 < th dose independent rect. 5 21
842 60.04 atmosphere 995.0 30 > th dose dependent rect. 5 6
843 60.04 radiation 40.0 90 < th dose dependent rect. 5 8
867 60.11 wind 7.0 4320 > th dose dependent rect. 15 1
873 60.14 wind 1.0 270 > th dose independent rect. 4 18
881 60.16 wind 9.0 10 < th dose dependent rect. 6 5
885 60.17 temperature 10.0 10 > th dose independent rect. 24 6
886 60.17 temperature 30.0 10 < th dose independent rect. 24 6
887 60.17 humidity 50.0 10 > th dose independent rect. 24 6
890 60.17 atmosphere 995.0 10 > th dose independent rect. 24 6
908 60.20 wind 7.0 90 < th dose independent rect. 5 8
909 60.20 precipitation 0.1 270 < th dose independent rect. 3 20
913 60.20 humidity 50.0 10 > th dose dependent rect. 24 6
914 60.20 precipitation 0.1 270 < th dose dependent rect. 3 20
930 60.25 wind 9.0 10 < th dose independent rect. 6 18
937 60.26 radiation 20.0 270 < th dose independent rect. 18 14
945 60.27 radiation 40.0 90 < th dose independent rect. 5 8
949 60.28 atmosphere 1015.0 10 < th dose independent rect. 24 6
991 60.38 temperature 10.0 30 > th dose dependent rect. 5 21