Os10g0395500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0395500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.16 | 0.231 | 10.6 | 0.148 | 0.538 | -0.516 | 0.412 | 0.709 | 0.0332 | 1.89 | 25.4 | 1383 | -- | -- |
| 24.36 | 0.23 | 10.6 | -0.0423 | 0.546 | -0.469 | 0.45 | -- | -0.00956 | 1.86 | 25.14 | 1342 | -- | -- |
| 24.78 | 0.232 | 10.6 | 0.154 | 0.543 | -0.529 | -- | 0.76 | 0.0586 | 2 | 24.57 | 1379 | -- | -- |
| 25.05 | 0.233 | 10.6 | -0.06 | 0.536 | -0.439 | -- | -- | -0.0127 | 1.99 | 25.34 | 1389 | -- | -- |
| 31.44 | 0.263 | 10.6 | 0.00592 | -- | -0.85 | -- | 0.74 | 0.0444 | -- | 24.57 | 1379 | -- | -- |
| 32.67 | 0.268 | 10.6 | -0.202 | 0.486 | -- | 0.349 | -- | -0.0607 | 1.87 | -- | -- | -- | -- |
| 33.13 | 0.27 | 10.6 | -0.214 | 0.487 | -- | -- | -- | -0.0629 | 1.98 | -- | -- | -- | -- |
| 31.72 | 0.263 | 10.6 | -0.0835 | -- | -0.796 | -- | -- | 0.0192 | -- | 24.57 | 1379 | -- | -- |
| 25.14 | 0.234 | 10.6 | -- | 0.538 | -0.449 | -- | -- | -0.00749 | 2 | 25.3 | 1395 | -- | -- |
| 47.43 | 0.322 | 10.6 | -0.193 | -- | -- | -- | -- | -0.0516 | -- | -- | -- | -- | -- |
| 34.33 | 0.274 | 10.6 | -- | 0.483 | -- | -- | -- | -0.0391 | 1.96 | -- | -- | -- | -- |
| 31.9 | 0.264 | 10.6 | -- | -- | -0.808 | -- | -- | 0.0294 | -- | 24.57 | 1379 | -- | -- |
| 48.42 | 0.325 | 10.6 | -- | -- | -- | -- | -- | -0.0301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.12 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 4 | 23.60 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 2 |
| 16 | 23.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 19 | 23.89 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 12 |
| 31 | 23.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 41 | 23.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 63 | 24.03 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 64 | 24.04 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 65 | 24.05 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 83 | 24.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 253 | 24.22 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 300 | 24.29 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 303 | 24.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 348 | 24.43 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 430 | 24.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 450 | 24.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 461 | 24.71 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 4 |
| 462 | 24.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 468 | 24.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 469 | 24.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 471 | 24.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 481 | 24.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 507 | 24.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 524 | 24.76 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 20 |
| 525 | 24.76 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 532 | 24.77 | temperature | 30 | 1440 | < th | dose independent | sin | 22 | NA |
| 535 | 24.77 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 536 | 24.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 537 | 24.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 538 | 24.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 541 | 24.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 546 | 24.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 552 | 24.78 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 603 | 24.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 682 | 24.80 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 743 | 24.83 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 12 |
| 757 | 24.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 762 | 24.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 763 | 24.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 771 | 24.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 774 | 24.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 776 | 24.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 786 | 24.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 792 | 24.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 804 | 24.89 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 829 | 24.90 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 862 | 24.91 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 863 | 24.91 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 890 | 24.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 894 | 24.93 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 923 | 24.94 | temperature | 30 | 1440 | > th | dose independent | sin | 21 | NA |
| 925 | 24.94 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 926 | 24.94 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 2 |