Os10g0390800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3) (EREBP-3) (AtERF3).
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Os10g0390800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3) (EREBP-3) (AtERF3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 281.15 | 0.788 | 3.15 | -0.201 | 0.242 | 2.26 | -0.843 | 7.25 | 0.357 | 10.7 | 9.4 | 9 | -- | -- |
| 293.65 | 0.798 | 3.13 | -0.166 | 0.267 | 0.818 | -0.607 | -- | 0.374 | 10.2 | 8.432 | 10 | -- | -- |
| 284.07 | 0.785 | 3.16 | -0.229 | 0.25 | 2.28 | -- | 7 | 0.362 | 10.7 | 9.4 | 8 | -- | -- |
| 293.45 | 0.798 | 3.12 | -0.172 | 0.274 | 0.98 | -- | -- | 0.384 | 10.6 | 8.4 | 8 | -- | -- |
| 287.72 | 0.79 | 3.16 | -0.232 | -- | 2.37 | -- | 6.7 | 0.36 | -- | 9.472 | 8 | -- | -- |
| 295.5 | 0.806 | 3.13 | -0.217 | 0.281 | -- | -0.587 | -- | 0.355 | 10.9 | -- | -- | -- | -- |
| 296.89 | 0.807 | 3.13 | -0.239 | 0.285 | -- | -- | -- | 0.353 | 11.3 | -- | -- | -- | -- |
| 297.04 | 0.803 | 3.13 | -0.129 | -- | 1.02 | -- | -- | 0.405 | -- | 8.26 | 7 | -- | -- |
| 293.51 | 0.798 | 3.12 | -- | 0.257 | 0.854 | -- | -- | 0.406 | 10.6 | 8.291 | 7 | -- | -- |
| 301.97 | 0.812 | 3.14 | -0.247 | -- | -- | -- | -- | 0.351 | -- | -- | -- | -- | -- |
| 298.4 | 0.808 | 3.13 | -- | 0.287 | -- | -- | -- | 0.38 | 11.4 | -- | -- | -- | -- |
| 297.58 | 0.803 | 3.13 | -- | -- | 0.923 | -- | -- | 0.406 | -- | 8.252 | 7 | -- | -- |
| 303.57 | 0.813 | 3.13 | -- | -- | -- | -- | -- | 0.378 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 275.97 | wind | 7e+00 | 90 | > th | dose independent | rect. | 21 | 14 |
| 2 | 276.00 | wind | 7e+00 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 6 | 276.47 | wind | 7e+00 | 90 | > th | dose independent | sin | 8 | NA |
| 8 | 276.61 | wind | 7e+00 | 90 | > th | dose dependent | sin | 9 | NA |
| 12 | 276.94 | wind | 9e+00 | 720 | > th | dose independent | rect. | 21 | 14 |
| 22 | 277.48 | atmosphere | 1e+03 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 62 | 278.36 | wind | 7e+00 | 90 | > th | dose independent | rect. | 20 | 18 |
| 105 | 279.18 | wind | 7e+00 | 90 | > th | dose dependent | rect. | 7 | 4 |
| 126 | 279.49 | wind | 5e+00 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 128 | 279.52 | wind | 5e+00 | 720 | > th | dose independent | rect. | 4 | 1 |
| 131 | 279.54 | atmosphere | 1e+03 | 10 | < th | dose independent | rect. | 11 | 1 |
| 141 | 279.57 | wind | 7e+00 | 90 | > th | dose independent | rect. | 7 | 4 |
| 215 | 280.07 | wind | 1e+00 | 90 | > th | dose dependent | rect. | 24 | 13 |
| 231 | 280.13 | temperature | 3e+01 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 232 | 280.18 | wind | 7e+00 | 10 | > th | dose dependent | sin | 7 | NA |
| 255 | 280.29 | wind | 7e+00 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 304 | 280.54 | wind | 7e+00 | 10 | > th | dose dependent | rect. | 18 | 21 |
| 308 | 280.58 | wind | 1e+00 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 317 | 280.68 | wind | 7e+00 | 10 | > th | dose dependent | rect. | 2 | 13 |
| 358 | 280.84 | wind | 7e+00 | 90 | < th | dose independent | sin | 4 | NA |
| 366 | 280.86 | wind | 7e+00 | 90 | > th | dose independent | rect. | 7 | 7 |
| 406 | 281.00 | wind | 9e+00 | 1440 | < th | dose independent | rect. | 21 | 14 |
| 411 | 281.03 | wind | 7e+00 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 461 | 281.14 | humidity | 9e+01 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 512 | 281.36 | wind | 1e+00 | 90 | > th | dose dependent | rect. | 15 | 22 |
| 569 | 281.54 | precipitation | 1e-01 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 572 | 281.54 | precipitation | 1e-01 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 624 | 281.68 | wind | 9e+00 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 654 | 281.77 | wind | 7e+00 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 693 | 281.85 | wind | 9e+00 | 90 | > th | dose independent | rect. | 12 | 23 |
| 708 | 281.88 | wind | 9e+00 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 717 | 281.90 | wind | 7e+00 | 10 | < th | dose independent | rect. | 13 | 23 |
| 760 | 282.07 | wind | 9e+00 | 10 | > th | dose independent | rect. | 11 | 11 |
| 787 | 282.10 | wind | 5e+00 | 720 | < th | dose independent | rect. | 2 | 6 |
| 820 | 282.16 | wind | 7e+00 | 10 | < th | dose independent | sin | 3 | NA |
| 841 | 282.22 | wind | 9e+00 | 10 | > th | dose independent | rect. | 11 | 8 |
| 999 | 282.45 | wind | 9e+00 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 1000 | 282.46 | wind | 9e+00 | 10 | > th | dose independent | sin | 20 | NA |