Os10g0387000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Choline phosphate cytidylyltransferase-like protein (Fragment).
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Os10g0387000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Choline phosphate cytidylyltransferase-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.37 | 0.4 | 10.6 | 0.41 | 0.576 | -0.655 | 0.534 | 0.987 | 0.191 | 22.4 | 24.21 | 10 | -- | -- |
| 72.82 | 0.397 | 10.6 | 0.281 | 0.582 | -0.583 | 0.42 | -- | 0.156 | 22.3 | 24.1 | 10 | -- | -- |
| 73.39 | 0.399 | 10.6 | 0.342 | 0.575 | -0.641 | -- | 0.519 | 0.179 | 22.2 | 24.1 | 11 | -- | -- |
| 73.54 | 0.399 | 10.6 | 0.267 | 0.579 | -0.604 | -- | -- | 0.157 | 22.2 | 24.1 | 9 | -- | -- |
| 91.85 | 0.449 | 10.5 | 0.434 | -- | -0.911 | -- | 0.984 | 0.22 | -- | 24.1 | 11 | -- | -- |
| 77.94 | 0.414 | 10.6 | 0.189 | 0.704 | -- | 0.536 | -- | 0.0859 | 23.5 | -- | -- | -- | -- |
| 79.18 | 0.417 | 10.6 | 0.168 | 0.702 | -- | -- | -- | 0.084 | 23.5 | -- | -- | -- | -- |
| 91.98 | 0.447 | 10.6 | 0.332 | -- | -0.85 | -- | -- | 0.209 | -- | 23.01 | 4 | -- | -- |
| 75.35 | 0.404 | 10.6 | -- | 0.589 | -0.527 | -- | -- | 0.124 | 22.4 | 24.1 | 9 | -- | -- |
| 110.07 | 0.49 | 10.6 | 0.187 | -- | -- | -- | -- | 0.0915 | -- | -- | -- | -- | -- |
| 79.92 | 0.418 | 10.6 | -- | 0.703 | -- | -- | -- | 0.0653 | 23.5 | -- | -- | -- | -- |
| 94.74 | 0.453 | 10.6 | -- | -- | -0.795 | -- | -- | 0.145 | -- | 24.07 | 4 | -- | -- |
| 110.99 | 0.492 | 10.6 | -- | -- | -- | -- | -- | 0.0708 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.37 | temperature | 25.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 2 | 59.52 | temperature | 25.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 4 | 59.93 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 5 | 60.03 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 7 | 60.07 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 8 | 60.08 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 12 | 60.32 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 21 | 61.04 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 23 | 61.59 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 2 | 5 |
| 25 | 61.62 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 41 | 62.23 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 61 | 63.07 | wind | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 104 | 64.15 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 111 | 64.33 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 153 | 64.98 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 6 |
| 167 | 65.10 | wind | 1.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 171 | 65.18 | temperature | 25.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 183 | 65.34 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 190 | 65.48 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 191 | 65.49 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 6 |
| 194 | 65.52 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 206 | 65.64 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 213 | 65.73 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 215 | 65.75 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 221 | 65.77 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 280 | 66.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 288 | 66.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 13 |
| 312 | 66.45 | temperature | 20.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 347 | 66.70 | temperature | 25.0 | 90 | > th | dose independent | sin | 5 | NA |
| 361 | 66.80 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 364 | 66.81 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 406 | 67.05 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 411 | 67.08 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 453 | 67.26 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 459 | 67.28 | wind | 5.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 462 | 67.28 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 464 | 67.28 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 465 | 67.28 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 473 | 67.28 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 474 | 67.28 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 12 |
| 475 | 67.28 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 476 | 67.28 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 477 | 67.29 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 555 | 67.54 | temperature | 30.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 592 | 67.65 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 593 | 67.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 597 | 67.65 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 601 | 67.65 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 606 | 67.65 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 607 | 67.65 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 608 | 67.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 612 | 67.65 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 664 | 67.82 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 671 | 67.86 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 726 | 68.06 | wind | 9.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 734 | 68.08 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 767 | 68.16 | temperature | 25.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 833 | 68.33 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 834 | 68.33 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 858 | 68.38 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 881 | 68.44 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 11 |
| 890 | 68.48 | temperature | 15.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 910 | 68.54 | temperature | 25.0 | 720 | < th | dose independent | rect. | 24 | 9 |
| 955 | 68.64 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 23 |