Os10g0381800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0381800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.06 | 0.345 | 8.86 | 1.78 | 0.533 | -0.901 | -0.503 | 1.8 | 0.659 | 1.74 | 26.6 | 1040 | -- | -- |
| 56.79 | 0.351 | 8.92 | 1.38 | 0.58 | -0.771 | -0.326 | -- | 0.597 | 1.65 | 26.2 | 984 | -- | -- |
| 55.01 | 0.345 | 8.86 | 1.76 | 0.533 | -0.904 | -- | 1.61 | 0.661 | 1.77 | 26.52 | 1039 | -- | -- |
| 56.83 | 0.351 | 8.91 | 1.37 | 0.537 | -0.769 | -- | -- | 0.562 | 1.6 | 26.3 | 976 | -- | -- |
| 64.54 | 0.374 | 8.83 | 1.98 | -- | -0.776 | -- | 2.02 | 0.687 | -- | 26.8 | 1840 | -- | -- |
| 70.91 | 0.395 | 8.95 | 1.12 | 0.392 | -- | -0.455 | -- | 0.336 | 3.17 | -- | -- | -- | -- |
| 71.57 | 0.396 | 8.95 | 1.13 | 0.392 | -- | -- | -- | 0.339 | 3.33 | -- | -- | -- | -- |
| 64.53 | 0.376 | 8.91 | 1.33 | -- | -0.453 | -- | -- | 0.529 | -- | 23.33 | 8971 | -- | -- |
| 101.18 | 0.468 | 8.96 | -- | 0.464 | -0.386 | -- | -- | 0.291 | 2.21 | 26.5 | 936 | -- | -- |
| 80.24 | 0.419 | 8.95 | 1.15 | -- | -- | -- | -- | 0.349 | -- | -- | -- | -- | -- |
| 105.31 | 0.48 | 8.98 | -- | 0.414 | -- | -- | -- | 0.213 | 3.32 | -- | -- | -- | -- |
| 108.78 | 0.487 | 8.96 | -- | -- | -0.278 | -- | -- | 0.32 | -- | 23.33 | 8971 | -- | -- |
| 115.01 | 0.501 | 8.98 | -- | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.61 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 3 | 55.67 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 4 | 55.68 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 5 | 55.70 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 7 | 55.82 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 10 | 56.02 | temperature | 20 | 90 | > th | dose dependent | sin | 13 | NA |
| 11 | 56.07 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 17 | 56.15 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 26 | 56.33 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 34 | 56.54 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 21 |
| 41 | 56.58 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 42 | 56.59 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 19 |
| 43 | 56.60 | temperature | 20 | 30 | > th | dose dependent | rect. | 24 | 23 |
| 46 | 56.66 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 47 | 56.67 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 19 |
| 79 | 56.90 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 16 |
| 83 | 56.93 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 8 |
| 105 | 57.02 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 106 | 57.04 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 114 | 57.10 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 7 |
| 119 | 57.12 | temperature | 20 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 165 | 57.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 166 | 57.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 181 | 57.36 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 185 | 57.37 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 22 |
| 192 | 57.39 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 195 | 57.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 232 | 57.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 17 |
| 291 | 57.61 | temperature | 25 | 720 | > th | dose independent | sin | 18 | NA |
| 311 | 57.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 324 | 57.64 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 333 | 57.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 396 | 57.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 397 | 57.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 402 | 57.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 414 | 57.73 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 17 |
| 457 | 57.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 10 |
| 461 | 57.78 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 481 | 57.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 19 | 6 |
| 508 | 57.81 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 519 | 57.82 | temperature | 25 | 720 | < th | dose independent | sin | 18 | NA |
| 588 | 57.87 | radiation | 10 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 617 | 57.89 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 21 |
| 668 | 57.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 681 | 57.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 699 | 57.95 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 714 | 57.96 | temperature | 20 | 1440 | > th | dose dependent | sin | 7 | NA |
| 767 | 57.99 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 821 | 58.03 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 827 | 58.03 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 927 | 58.12 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 981 | 58.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |