Os10g0380800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tyrosine decarboxylase 1 (EC 4.1.1.25) (ELI5) (Fragment).
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Os10g0380800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tyrosine decarboxylase 1 (EC 4.1.1.25) (ELI5) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.58 | 0.469 | 9.27 | -0.256 | 1.06 | -2.12 | -0.0771 | 3.78 | 0.0516 | 6.96 | 93.09 | 439 | 12.2 | -- |
| 108.58 | 0.485 | 9.27 | -0.189 | 1.08 | -2.12 | 0.362 | -- | 0.0648 | 6.84 | 93.12 | 437 | 12 | -- |
| 99.44 | 0.464 | 9.27 | -0.26 | 1.06 | -2.09 | -- | 3.75 | 0.0447 | 6.94 | 92.94 | 434 | 12.2 | -- |
| 108.81 | 0.486 | 9.28 | -0.18 | 1.08 | -2.16 | -- | -- | 0.0637 | 6.91 | 93.34 | 448 | 12 | -- |
| 154.28 | 0.579 | 9.28 | -0.25 | -- | -1.9 | -- | 4.11 | 0.108 | -- | 92.95 | 408 | 12.9 | -- |
| 136.12 | 0.547 | 9.25 | -0.248 | 0.915 | -- | 0.218 | -- | 0.186 | 7.67 | -- | -- | -- | -- |
| 136.25 | 0.547 | 9.25 | -0.242 | 0.915 | -- | -- | -- | 0.185 | 7.68 | -- | -- | -- | -- |
| 163.05 | 0.595 | 9.29 | -0.171 | -- | -1.76 | -- | -- | 0.122 | -- | 93.43 | 354 | 12.8 | -- |
| 109.64 | 0.488 | 9.28 | -- | 1.08 | -2.17 | -- | -- | 0.0791 | 6.9 | 93.22 | 448 | 12 | -- |
| 181.37 | 0.629 | 9.28 | -0.23 | -- | -- | -- | -- | 0.199 | -- | -- | -- | -- | -- |
| 137.8 | 0.549 | 9.25 | -- | 0.913 | -- | -- | -- | 0.212 | 7.7 | -- | -- | -- | -- |
| 163.83 | 0.596 | 9.29 | -- | -- | -1.8 | -- | -- | 0.139 | -- | 93.36 | 354 | 12.8 | -- |
| 182.76 | 0.631 | 9.27 | -- | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.93 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 2 | 108.54 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 108.97 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 11 | 111.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 12 | 111.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 14 | 111.62 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 15 | 111.68 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 16 | 111.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 17 | 111.69 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 19 | 111.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 20 | 111.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 40 | 112.21 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 12 | 15 |
| 61 | 112.68 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 100 | 113.52 | humidity | 90.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 106 | 113.64 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 145 | 114.98 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 153 | 115.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 173 | 115.93 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 177 | 115.98 | humidity | 90.0 | 30 | > th | dose dependent | sin | 11 | NA |
| 203 | 116.41 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 19 |
| 217 | 116.66 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 20 | 14 |
| 219 | 116.66 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 225 | 116.71 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 4 |
| 242 | 116.84 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 244 | 116.84 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 246 | 116.84 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 297 | 116.84 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 299 | 116.84 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 301 | 116.84 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 354 | 116.85 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 17 | 17 |
| 369 | 116.90 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 17 | 15 |
| 405 | 117.14 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 443 | 117.49 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 20 | 23 |
| 444 | 117.50 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 459 | 117.57 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 3 |
| 465 | 117.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 479 | 117.64 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 487 | 117.65 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 528 | 117.73 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 531 | 117.73 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 535 | 117.74 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 555 | 117.80 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 598 | 117.91 | humidity | 90.0 | 30 | > th | dose dependent | no | NA | NA |
| 607 | 117.91 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 622 | 117.93 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 633 | 117.96 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 679 | 118.16 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 713 | 118.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 771 | 118.36 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 852 | 118.63 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 864 | 118.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 18 |
| 868 | 118.68 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 871 | 118.68 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 878 | 118.70 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 8 |
| 924 | 118.85 | humidity | 90.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 937 | 118.90 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 952 | 118.94 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 960 | 118.98 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 8 |