Os10g0368400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Adapter-related protein complex 4 sigma 1 subunit (Sigma subunit of AP-4) (AP-4 adapter complex sigma subunit).
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Os10g0368400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Adapter-related protein complex 4 sigma 1 subunit (Sigma subunit of AP-4) (AP-4 adapter complex sigma subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.18 | 0.436 | 6.29 | -0.751 | 1.47 | 3.18 | 0.385 | 1.35 | 0.131 | 10.7 | 10.12 | 706 | -- | -- |
| 87.41 | 0.435 | 6.32 | -0.973 | 1.43 | 3.29 | 0.0827 | -- | 0.0593 | 10.3 | 11.32 | 611 | -- | -- |
| 86.68 | 0.434 | 6.3 | -0.79 | 1.46 | 3.19 | -- | 1.03 | 0.116 | 10.6 | 9.821 | 686 | -- | -- |
| 87.43 | 0.435 | 6.32 | -0.959 | 1.42 | 3.27 | -- | -- | 0.0637 | 10.2 | 11.16 | 606 | -- | -- |
| 102.16 | 0.473 | 6.32 | -0.602 | -- | 3.35 | -- | 1.63 | 0.15 | -- | 9.821 | 686 | -- | -- |
| 214.4 | 0.686 | 6.23 | -0.186 | 0.949 | -- | 0.26 | -- | 0.557 | 12.6 | -- | -- | -- | -- |
| 214.68 | 0.686 | 6.23 | -0.177 | 0.948 | -- | -- | -- | 0.558 | 12.5 | -- | -- | -- | -- |
| 104.44 | 0.478 | 6.35 | -0.827 | -- | 3.38 | -- | -- | 0.0881 | -- | 11.16 | 606 | -- | -- |
| 108.64 | 0.485 | 6.29 | -- | 1.24 | 2.89 | -- | -- | 0.221 | 9.97 | 6.499 | 492 | -- | -- |
| 271.08 | 0.769 | 6.25 | -0.21 | -- | -- | -- | -- | 0.542 | -- | -- | -- | -- | -- |
| 215.5 | 0.687 | 6.23 | -- | 0.951 | -- | -- | -- | 0.578 | 12.6 | -- | -- | -- | -- |
| 121.12 | 0.513 | 6.32 | -- | -- | 3.14 | -- | -- | 0.208 | -- | 10.24 | 2 | -- | -- |
| 272.24 | 0.77 | 6.24 | -- | -- | -- | -- | -- | 0.565 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 4 | 83.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 8 | 83.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 22 |
| 16 | 84.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 60 | 86.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 61 | 86.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 65 | 86.22 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 76 | 86.49 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 157 | 88.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 174 | 88.80 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 176 | 88.81 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 186 | 88.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 190 | 88.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 214 | 89.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 279 | 89.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 281 | 89.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 302 | 89.95 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 351 | 90.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 366 | 90.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 12 |
| 402 | 90.54 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 436 | 90.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 445 | 90.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 516 | 90.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 528 | 91.06 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 629 | 91.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 637 | 91.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 652 | 91.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 678 | 91.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |