Os10g0358600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0358600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.37 | 0.681 | 7.08 | -2.99 | 2.85 | 1.4 | -0.649 | -5.43 | 0.054 | 16.9 | 49.74 | 4256 | -- | -- |
| 218.85 | 0.689 | 6.98 | -2.79 | 2.92 | 0.61 | -0.653 | -- | -0.135 | 17.1 | 83 | 28678 | -- | -- |
| 211.44 | 0.677 | 7.08 | -2.99 | 2.84 | 1.39 | -- | -5.4 | 0.0512 | 17 | 49.71 | 4256 | -- | -- |
| 213.47 | 0.68 | 7.02 | -2.63 | 2.83 | 0.903 | -- | -- | -0.253 | 16.9 | 85.29 | 28415 | -- | -- |
| 632.72 | 1.17 | 7.02 | -2.82 | -- | 0.637 | -- | -3.84 | -0.103 | -- | 48 | 4227 | -- | -- |
| 232.05 | 0.714 | 6.95 | -2.69 | 2.82 | -- | -0.549 | -- | -0.00172 | 17 | -- | -- | -- | -- |
| 232.81 | 0.715 | 6.96 | -2.7 | 2.81 | -- | -- | -- | -0.00446 | 17 | -- | -- | -- | -- |
| 544.95 | 1.09 | 6.92 | -2.83 | -- | 0.956 | -- | -- | -0.0722 | -- | 80 | 29314 | -- | -- |
| 288.36 | 0.791 | 6.91 | -- | 2.75 | 2.38 | -- | -- | 0.232 | 17.1 | 64.49 | 34810 | -- | -- |
| 648.92 | 1.19 | 6.93 | -2.8 | -- | -- | -- | -- | -0.0764 | -- | -- | -- | -- | -- |
| 424.37 | 0.964 | 6.89 | -- | 2.86 | -- | -- | -- | 0.296 | 17 | -- | -- | -- | -- |
| 701.2 | 1.23 | 6.91 | -- | -- | 2.64 | -- | -- | 0.172 | -- | 64 | 35050 | -- | -- |
| 855.42 | 1.37 | 6.86 | -- | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.15 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 3 |
| 3 | 199.78 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 9 |
| 4 | 200.04 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 9 |
| 5 | 200.83 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 11 |
| 11 | 203.52 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 12 | 203.62 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 15 | 203.84 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 16 | 203.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 17 | 203.85 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 18 | 203.87 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 26 | 204.09 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 30 | 204.14 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 33 | 204.22 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 34 | 204.23 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 35 | 204.23 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 39 | 204.61 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 78 | 204.84 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 79 | 204.84 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 118 | 204.96 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 144 | 205.18 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 149 | 205.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 150 | 205.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 152 | 205.22 | temperature | 30.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 207 | 205.35 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 22 | 6 |
| 211 | 205.36 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 8 |
| 217 | 205.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 246 | 205.50 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 256 | 205.53 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 259 | 205.54 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 286 | 205.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 289 | 205.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 292 | 205.59 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 332 | 205.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 345 | 205.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 347 | 205.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 350 | 205.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 351 | 205.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 368 | 205.71 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 412 | 205.75 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 14 | 16 |
| 455 | 205.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 526 | 205.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 572 | 205.91 | temperature | 30.0 | 43200 | > th | dose dependent | no | NA | NA |
| 669 | 205.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 14 |
| 670 | 205.93 | temperature | 30.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 693 | 205.94 | temperature | 30.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 844 | 206.08 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 871 | 206.10 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 905 | 206.14 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 976 | 206.20 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 14 | 10 |
| 985 | 206.22 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 9 |