Os10g0343200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
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Os10g0343200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF588 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.17 | 0.37 | 9.97 | -0.733 | 0.932 | -0.282 | 0.045 | -2.51 | -0.284 | 0.465 | 20.22 | 1536 | -- | -- |
| 65.01 | 0.376 | 9.91 | 0.00333 | 0.958 | -0.471 | -0.0909 | -- | -0.195 | 0.601 | 28.16 | 2781 | -- | -- |
| 62.18 | 0.367 | 9.97 | -0.737 | 0.931 | -0.28 | -- | -2.52 | -0.285 | 0.464 | 20.3 | 1541 | -- | -- |
| 64.83 | 0.375 | 9.91 | 0.00384 | 0.966 | -0.462 | -- | -- | -0.205 | 0.459 | 28.01 | 2825 | -- | -- |
| 91.13 | 0.447 | 9.85 | 0.0465 | -- | -1.2 | -- | -0.513 | 0.0136 | -- | 20.3 | 1541 | -- | -- |
| 74.04 | 0.403 | 9.9 | -0.134 | 0.915 | -- | -0.00834 | -- | -0.173 | 0.412 | -- | -- | -- | -- |
| 74.04 | 0.403 | 9.9 | -0.134 | 0.915 | -- | -- | -- | -0.172 | 0.411 | -- | -- | -- | -- |
| 91.39 | 0.447 | 9.84 | 0.134 | -- | -1.22 | -- | -- | 0.0391 | -- | 20.3 | 1541 | -- | -- |
| 64.83 | 0.375 | 9.91 | -- | 0.967 | -0.465 | -- | -- | -0.212 | 0.461 | 28.16 | 2825 | -- | -- |
| 126.59 | 0.526 | 9.88 | -0.103 | -- | -- | -- | -- | -0.158 | -- | -- | -- | -- | -- |
| 74.51 | 0.404 | 9.9 | -- | 0.913 | -- | -- | -- | -0.158 | 0.404 | -- | -- | -- | -- |
| 91.85 | 0.448 | 9.84 | -- | -- | -1.2 | -- | -- | 0.0204 | -- | 20.3 | 1541 | -- | -- |
| 126.87 | 0.526 | 9.88 | -- | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.17 | radiation | 40 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 2 | 59.27 | radiation | 1 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 4 | 59.42 | radiation | 30 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 18 | 59.90 | radiation | 40 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 64 | 60.13 | radiation | 40 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 65 | 60.13 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 71 | 60.15 | radiation | 30 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 88 | 60.17 | radiation | 40 | 1440 | < th | dose dependent | rect. | 22 | 14 |
| 100 | 60.23 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 103 | 60.27 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 104 | 60.27 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 120 | 60.35 | radiation | 40 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 123 | 60.37 | radiation | 20 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 124 | 60.38 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 170 | 60.50 | radiation | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 236 | 60.61 | radiation | 30 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 237 | 60.62 | radiation | 30 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 248 | 60.63 | radiation | 30 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 275 | 60.68 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 279 | 60.70 | radiation | 30 | 1440 | > th | dose independent | sin | 9 | NA |
| 295 | 60.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 302 | 60.76 | radiation | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 303 | 60.77 | radiation | 40 | 1440 | > th | dose independent | sin | 11 | NA |
| 323 | 60.79 | humidity | 70 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 324 | 60.79 | humidity | 70 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 498 | 61.00 | radiation | 40 | 1440 | < th | dose dependent | sin | 9 | NA |
| 502 | 61.01 | radiation | 30 | 1440 | < th | dose independent | sin | 9 | NA |
| 513 | 61.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 525 | 61.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 609 | 61.23 | radiation | 20 | 10 | < th | dose independent | rect. | 17 | 23 |
| 676 | 61.35 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 712 | 61.41 | radiation | 40 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 715 | 61.43 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 736 | 61.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 820 | 61.58 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 891 | 61.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 930 | 61.70 | radiation | 40 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 941 | 61.73 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 957 | 61.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 18 |
| 993 | 61.81 | temperature | 25 | 1440 | > th | dose dependent | sin | 13 | NA |