Os10g0343100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : t-snare domain containing protein.
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Os10g0343100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : t-snare domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.91 | 0.304 | 11.2 | 0.575 | 2.2 | 1.08 | 0.11 | 0.27 | -0.0546 | 7.52 | 27.35 | 103 | -- | -- |
| 42.03 | 0.302 | 11.2 | 0.6 | 2.19 | 1.07 | 0.127 | -- | -0.0496 | 7.53 | 27.54 | 99 | -- | -- |
| 41.94 | 0.302 | 11.2 | 0.574 | 2.2 | 1.09 | -- | 0.269 | -0.0524 | 7.52 | 27.41 | 101 | -- | -- |
| 42.03 | 0.302 | 11.2 | 0.62 | 2.21 | 1.07 | -- | -- | -0.0479 | 7.52 | 27.5 | 90 | -- | -- |
| 214.76 | 0.683 | 11.2 | 0.991 | -- | 2.87 | -- | 0.263 | 0.172 | -- | 34 | 486 | -- | -- |
| 57.91 | 0.357 | 11.2 | 0.351 | 2.32 | -- | 0.0876 | -- | -0.277 | 7.05 | -- | -- | -- | -- |
| 57.93 | 0.356 | 11.2 | 0.352 | 2.32 | -- | -- | -- | -0.277 | 7.05 | -- | -- | -- | -- |
| 214.82 | 0.683 | 11.2 | 1.03 | -- | 2.88 | -- | -- | 0.177 | -- | 41.84 | 486 | -- | -- |
| 51.15 | 0.333 | 11.2 | -- | 2.23 | 0.808 | -- | -- | -0.164 | 7.38 | 27.39 | 103 | -- | -- |
| 341.44 | 0.863 | 11.3 | 0.398 | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
| 61.2 | 0.366 | 11.2 | -- | 2.32 | -- | -- | -- | -0.316 | 7.04 | -- | -- | -- | -- |
| 240.67 | 0.723 | 11.2 | -- | -- | 2.52 | -- | -- | 0.0199 | -- | 75.01 | 474 | -- | -- |
| 345.62 | 0.868 | 11.3 | -- | -- | -- | -- | -- | -0.279 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 4 | 40.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 9 | 41.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 33 | 42.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 46 | 42.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 76 | 43.02 | temperature | 15 | 90 | > th | dose dependent | sin | 10 | NA |
| 90 | 43.11 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 104 | 43.19 | temperature | 30 | 90 | < th | dose dependent | sin | 11 | NA |
| 121 | 43.26 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 143 | 43.36 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 146 | 43.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 153 | 43.42 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 22 |
| 163 | 43.46 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 188 | 43.52 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 192 | 43.53 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 265 | 43.85 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 329 | 44.12 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 335 | 44.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 15 |
| 357 | 44.21 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 23 |
| 381 | 44.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 407 | 44.37 | temperature | 25 | 270 | < th | dose dependent | sin | 18 | NA |
| 462 | 44.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 495 | 44.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 498 | 44.63 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 22 |
| 533 | 44.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 539 | 44.72 | temperature | 25 | 720 | < th | dose dependent | sin | 21 | NA |
| 579 | 44.82 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 20 |
| 647 | 44.95 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 23 |
| 684 | 45.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 5 |
| 712 | 45.06 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 770 | 45.12 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 793 | 45.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 843 | 45.25 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 877 | 45.31 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 16 |
| 889 | 45.32 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 934 | 45.38 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |