BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0343100 Os10g0343100|AK100724
         (367 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27700.1  | chr1:9640394-9641752 REVERSE LENGTH=298            172   4e-43
AT4G30240.1  | chr4:14808359-14809745 REVERSE LENGTH=301          115   3e-26
AT2G18860.1  | chr2:8164358-8165650 FORWARD LENGTH=297            114   7e-26

>AT1G27700.1 | chr1:9640394-9641752 REVERSE LENGTH=298
          Length = 297

 Score =  172 bits (435), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 167/347 (48%), Gaps = 70/347 (20%)

Query: 1   MATSFDRWEKDPFFPAAEEVQESADRMESVYRRWLQERKEVGGGAVETXXXXXXXXXXXX 60
           M TS DRWEKDPFFPAAEEVQESADRMES YR WL  +++                    
Sbjct: 1   MTTSLDRWEKDPFFPAAEEVQESADRMESAYRTWLNGKRD--------------SSKVWD 46

Query: 61  XXXXXXELHTALGTAKWQLDELQRAIKSNYSVVLAGKDTRARHDDFVSAIGHRILEVEKF 120
                 +LH ALGT KWQLDE Q+A+KS+Y   L+  +TR RH +F   +  ++ ++EK 
Sbjct: 47  SEQLHRDLHAALGTTKWQLDEFQKAVKSSYDNRLSD-ETRDRHREFTFVMEAQVSKIEKS 105

Query: 121 LKESNTTEGRGPLSWVRLDEGEREELAHFLSAGTYQKRDEVVTITSAGDIEVGSNARRVK 180
           LKE+  ++G+G   WVRLDE +R ELA FL+  +                          
Sbjct: 106 LKEAAQSDGKGTPRWVRLDEDDRNELALFLTGPS-------------------------- 139

Query: 181 KGVXXXXXXXXXXXXXXXLVSTKEETAPGHRRTASAYADIGSWTITIPDEANGIDEQSFD 240
                                + +    GHRRTASA A+  +W I + D  +G+ ++S D
Sbjct: 140 --------------------ESAKANPNGHRRTASA-AEFSAWNIAVSD--DGLVKKSCD 176

Query: 241 DXXXXXXXXXXXXXXXMNAFQSKTRMKTKNGAKKLAGADQQDVVETLPLTNSRSCQGFDG 300
           +               +N         +K+  +K  G D+Q   +   L    + Q  +G
Sbjct: 177 EPVVRPPRKVPSFSGFLNYMDP----VSKHCNRKWKGLDRQGDSDAALLPIQANQQDMNG 232

Query: 301 LFQRSKSCLSTSDDEDNCNKKLYGCLGAFRRLLQRSQYQVQYGRPIQ 347
             +R KSC+    +ED   K+L+G  GA +R LQRSQY+++Y + + 
Sbjct: 233 CSERGKSCMEC--EEDCYEKQLHGWYGALQRQLQRSQYRMRYSKSVH 277



>AT4G30240.1 | chr4:14808359-14809745 REVERSE LENGTH=301
          Length = 300

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 92/154 (59%), Gaps = 15/154 (9%)

Query: 1   MATSFDRWEKDPFFPAAEEVQESADRMESVYRRWLQERKEVGGGAVETXXXXXXXXXXXX 60
           +A SFD W+KD FF AAEEVQESAD MES YR W +E+++ G  +VE+            
Sbjct: 3   VANSFDLWQKDVFFSAAEEVQESADIMESAYRLWFKEKRD-GRVSVES------------ 49

Query: 61  XXXXXXELHTALGTAKWQLDELQRAIKSNYSVVLAGKDTRARHDDFVSAIGHRILEVEKF 120
                 EL  AL TAKWQL+E +RA+  ++        T  RH  FV+AI ++I +VE  
Sbjct: 50  -DELCKELQAALSTAKWQLEEFERAVSLSHGNC-RDDTTLTRHKQFVTAIENQIYQVEST 107

Query: 121 LKESNTTEGRGPLSWVRLDEGEREELAHFLSAGT 154
           L ES +  G+ PL WV L++ ER++LA FLS  +
Sbjct: 108 LLESLSENGKQPLRWVDLNKEERDDLAMFLSGSS 141



>AT2G18860.1 | chr2:8164358-8165650 FORWARD LENGTH=297
          Length = 296

 Score =  114 bits (286), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 22/154 (14%)

Query: 1   MATSFDRWEKDPFFPAAEEVQESADRMESVYRRWLQERKEVGGGAVETXXXXXXXXXXXX 60
           +  SFD W+KD FF AAEEVQ+S D MES YR W++E+K+                    
Sbjct: 3   VVNSFDLWQKDVFFSAAEEVQKSTDIMESAYRLWIREKKD-------------------- 42

Query: 61  XXXXXXELHTALGTAKWQLDELQRAIKSNYSVVLAGKDTRARHDDFVSAIGHRILEVEKF 120
                 EL  ALGTAKWQL+E ++A++ ++        +  RH  FV+AI ++I  VE  
Sbjct: 43  --EICKELQAALGTAKWQLEEFEKAVRLSHKRCGDNDSSSTRHKQFVTAIENQIHRVETS 100

Query: 121 LKESNTTEGRGPLSWVRLDEGEREELAHFLSAGT 154
           L+E+ +  G+ PL WV L+E ER++LA FLS  +
Sbjct: 101 LQEAYSENGKKPLRWVDLNEEERDDLAMFLSGSS 134



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.130    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,495,904
Number of extensions: 229825
Number of successful extensions: 558
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 551
Number of HSP's successfully gapped: 4
Length of query: 367
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 267
Effective length of database: 8,364,969
Effective search space: 2233446723
Effective search space used: 2233446723
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)