Os10g0326800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0326800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.46 | 0.597 | 4.21 | 2.89 | 0.401 | 1.52 | 0.172 | 1.83 | 0.93 | 23.1 | 66.03 | 1369 | -- | -- |
| 165.52 | 0.599 | 4.2 | 3.09 | 0.355 | 1.6 | 0.17 | -- | 0.961 | 22.6 | 64.94 | 1405 | -- | -- |
| 161.57 | 0.592 | 4.21 | 2.88 | 0.403 | 1.52 | -- | 1.81 | 0.929 | 23.2 | 66 | 1366 | -- | -- |
| 165.61 | 0.599 | 4.2 | 3.09 | 0.354 | 1.6 | -- | -- | 0.965 | 22.9 | 65 | 1404 | -- | -- |
| 168.86 | 0.605 | 4.2 | 2.92 | -- | 1.54 | -- | 1.57 | 0.936 | -- | 66.17 | 1468 | -- | -- |
| 211.2 | 0.681 | 4.24 | 3.09 | 0.34 | -- | 0.148 | -- | 0.807 | 21.8 | -- | -- | -- | -- |
| 211.27 | 0.681 | 4.24 | 3.08 | 0.338 | -- | -- | -- | 0.806 | 22 | -- | -- | -- | -- |
| 171.7 | 0.61 | 4.19 | 3.08 | -- | 1.61 | -- | -- | 0.967 | -- | 65 | 1488 | -- | -- |
| 392.39 | 0.923 | 4.24 | -- | 0.28 | 2.11 | -- | -- | 0.848 | 23.3 | 83.28 | 1519 | -- | -- |
| 218.15 | 0.69 | 4.23 | 3.08 | -- | -- | -- | -- | 0.806 | -- | -- | -- | -- | -- |
| 461.17 | 1 | 4.32 | -- | 0.355 | -- | -- | -- | 0.463 | 22.6 | -- | -- | -- | -- |
| 397.51 | 0.929 | 4.23 | -- | -- | 2.12 | -- | -- | 0.809 | -- | 82.83 | 1549 | -- | -- |
| 468.94 | 1.01 | 4.31 | -- | -- | -- | -- | -- | 0.464 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.04 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 2 | 161.32 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 7 | 161.76 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 19 | 22 |
| 13 | 161.99 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 23 | 162.30 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 40 | 162.57 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 44 | 162.61 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 53 | 162.70 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 57 | 162.77 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 69 | 162.89 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 78 | 162.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 93 | 163.14 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 112 | 163.33 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 118 | 163.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 124 | 163.39 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 127 | 163.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 138 | 163.50 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 144 | 163.51 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 151 | 163.56 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 189 | 163.79 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 19 |
| 195 | 163.84 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 10 |
| 213 | 163.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 215 | 163.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 223 | 164.03 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 252 | 164.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 286 | 164.33 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 287 | 164.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 294 | 164.39 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 335 | 164.58 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 345 | 164.62 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 356 | 164.66 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 357 | 164.66 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 365 | 164.69 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 439 | 164.86 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 440 | 164.86 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 463 | 164.90 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 483 | 164.96 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 510 | 165.03 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 559 | 165.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 572 | 165.19 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 574 | 165.20 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 612 | 165.21 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 627 | 165.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 634 | 165.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 684 | 165.41 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 736 | 165.51 | humidity | 90.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 770 | 165.58 | temperature | 30.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 794 | 165.62 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 802 | 165.63 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 18 |
| 903 | 165.85 | temperature | 30.0 | 14400 | > th | dose independent | sin | 5 | NA |