Os10g0326400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0326400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284.68 | 0.793 | 2.89 | 0.124 | 0.0174 | 14.7 | 1.01 | 45.7 | -0.0123 | 6.67 | 7 | 90 | 7.98 | 1 |
| 329.27 | 0.845 | 2.82 | 0.0781 | 0.0228 | 11.6 | 0.767 | -- | 0.145 | 5.15 | 7.491 | 88 | 8.07 | 0.866 |
| 287.23 | 0.789 | 2.89 | 0.142 | 0.0234 | 14.9 | -- | 47.1 | -0.0151 | 8.64 | 7 | 89 | 7.97 | 1 |
| 288.74 | 0.791 | 2.86 | 0.137 | 0.0189 | 5.55 | -- | -- | 0.00416 | 1.7 | 7.175 | 103 | 8.02 | 0.719 |
| 287.26 | 0.789 | 2.89 | 0.143 | -- | 15 | -- | 47.3 | -0.0148 | -- | 6.986 | 89 | 7.96 | 0.998 |
| 318.94 | 0.837 | 2.87 | -0.0122 | 0.0664 | -- | 0.935 | -- | -0.0386 | 6.82 | -- | -- | -- | -- |
| 320.99 | 0.839 | 2.87 | 0.0058 | 0.0859 | -- | -- | -- | -0.0401 | 9.41 | -- | -- | -- | -- |
| 287.62 | 0.79 | 2.86 | 0.0742 | -- | 5.64 | -- | -- | 0.0146 | -- | 7.2 | 104 | 8.02 | 0.7 |
| 287.34 | 0.789 | 2.87 | -- | 0.0156 | 5.2 | -- | -- | -0.0124 | 11.5 | 7.105 | 101 | 7.88 | 0.786 |
| 321.43 | 0.838 | 2.87 | 0.00531 | -- | -- | -- | -- | -0.0398 | -- | -- | -- | -- | -- |
| 320.99 | 0.838 | 2.87 | -- | 0.0859 | -- | -- | -- | -0.0407 | 9.4 | -- | -- | -- | -- |
| 287.35 | 0.79 | 2.87 | -- | -- | 5.23 | -- | -- | -0.0184 | -- | 7.116 | 100 | 7.89 | 0.807 |
| 321.43 | 0.837 | 2.87 | -- | -- | -- | -- | -- | -0.0404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 284.85 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 2 | 285.14 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 7 | 287.20 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 19 | 287.20 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 53 | 290.99 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 55 | 291.62 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 57 | 291.67 | temperature | 20.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 60 | 292.22 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 64 | 292.22 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 74 | 292.87 | temperature | 20.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 80 | 293.04 | temperature | 20.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 128 | 294.71 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 136 | 295.24 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 137 | 295.25 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 139 | 295.28 | temperature | 20.0 | 270 | < th | dose independent | sin | 4 | NA |
| 140 | 295.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 142 | 295.33 | temperature | 20.0 | 270 | > th | dose independent | sin | 4 | NA |
| 201 | 297.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 202 | 297.08 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 216 | 297.57 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 218 | 297.62 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 230 | 297.84 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 235 | 297.89 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 12 |
| 251 | 298.13 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 253 | 298.14 | wind | 7.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 292 | 298.51 | wind | 7.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 323 | 298.85 | temperature | 20.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 327 | 298.92 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 329 | 298.95 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 378 | 299.47 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 406 | 299.81 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 456 | 300.37 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 459 | 300.38 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 24 | 3 |
| 463 | 300.42 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 496 | 300.83 | wind | 1.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 505 | 300.89 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 511 | 301.02 | wind | 9.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 519 | 301.10 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 547 | 301.33 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 576 | 301.47 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 596 | 301.55 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 605 | 301.59 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 645 | 302.07 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 689 | 302.31 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 726 | 302.62 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 744 | 302.71 | wind | 9.0 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 752 | 302.76 | wind | 1.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 772 | 302.83 | wind | 9.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 785 | 302.84 | wind | 9.0 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 790 | 302.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 798 | 302.87 | wind | 9.0 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 802 | 302.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 804 | 302.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 829 | 302.93 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 859 | 303.06 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 867 | 303.09 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 879 | 303.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 880 | 303.13 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 883 | 303.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 891 | 303.17 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 905 | 303.21 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 906 | 303.21 | temperature | 20.0 | 270 | < th | dose independent | rect. | 13 | 19 |
| 908 | 303.21 | wind | 7.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 911 | 303.23 | wind | 9.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 938 | 303.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 11 |
| 983 | 303.54 | wind | 7.0 | 720 | > th | dose dependent | rect. | 17 | 12 |