Os10g0321700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ribonucleoprotein like protein.
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Os10g0321700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ribonucleoprotein like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.99 | 0.364 | 11.8 | 1.35 | 2.73 | 1.45 | 0.246 | 1.11 | 0.262 | 17.6 | 22.71 | 10 | -- | -- |
| 61.7 | 0.369 | 11.8 | 1.45 | 2.72 | 1.27 | 0.0871 | -- | 0.279 | 17.6 | 22.71 | 10 | -- | -- |
| 59.48 | 0.362 | 11.8 | 1.34 | 2.73 | 1.71 | -- | 1.57 | 0.245 | 17.6 | 21.66 | 6 | -- | -- |
| 61.69 | 0.366 | 11.8 | 1.45 | 2.72 | 1.26 | -- | -- | 0.281 | 17.6 | 22.8 | 10 | -- | -- |
| 441.59 | 0.984 | 11.8 | 1.24 | -- | 0.841 | -- | 0.223 | 0.136 | -- | 21.66 | 6 | -- | -- |
| 80.55 | 0.421 | 11.8 | 1.2 | 2.66 | -- | 0.0276 | -- | 0.125 | 17.8 | -- | -- | -- | -- |
| 80.55 | 0.42 | 11.8 | 1.2 | 2.66 | -- | -- | -- | 0.125 | 17.8 | -- | -- | -- | -- |
| 441.25 | 0.983 | 11.8 | 1.26 | -- | 0.727 | -- | -- | 0.151 | -- | 22.8 | 10 | -- | -- |
| 112.78 | 0.497 | 11.9 | -- | 2.67 | 0.689 | -- | -- | 0.059 | 17.7 | 22.65 | 10 | -- | -- |
| 448.24 | 0.989 | 11.8 | 1.12 | -- | -- | -- | -- | 0.0625 | -- | -- | -- | -- | -- |
| 118.74 | 0.51 | 11.9 | -- | 2.64 | -- | -- | -- | -0.00935 | 17.9 | -- | -- | -- | -- |
| 480.36 | 1.02 | 11.8 | -- | -- | 0.284 | -- | -- | -0.0344 | -- | 22.65 | 10 | -- | -- |
| 481.47 | 1.02 | 11.8 | -- | -- | -- | -- | -- | -0.062 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.95 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 3 | 52.08 | temperature | 10 | 10 | > th | dose dependent | sin | 10 | NA |
| 5 | 52.12 | temperature | 30 | 10 | < th | dose dependent | sin | 10 | NA |
| 22 | 53.14 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 23 | 53.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 27 | 53.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 38 | 53.76 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 41 | 53.84 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 61 | 54.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 12 |
| 115 | 55.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 2 |
| 129 | 55.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 12 |
| 173 | 56.14 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 14 |
| 206 | 56.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 212 | 56.56 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 357 | 57.64 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 14 |
| 358 | 57.64 | temperature | 20 | 30 | > th | dose independent | rect. | 17 | 16 |
| 365 | 57.70 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 380 | 57.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 447 | 58.29 | temperature | 20 | 30 | > th | dose independent | rect. | 15 | 18 |
| 449 | 58.30 | temperature | 25 | 720 | > th | dose independent | rect. | 19 | 3 |
| 465 | 58.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 10 |
| 511 | 58.60 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 563 | 58.93 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 635 | 59.22 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 8 |
| 644 | 59.26 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 673 | 59.40 | temperature | 20 | 30 | > th | dose independent | sin | 11 | NA |
| 687 | 59.46 | temperature | 20 | 10 | < th | dose independent | sin | 10 | NA |
| 727 | 59.58 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |