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Os10g0316400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.41 (0.0181) R2 : 0.278
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.617 (0.0475) R2dC : 0.268 R2C : 0.267
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0891 (0.0381) R2dN8 : 0.0112 R2N8 : 0.01
σ : 0.342
deviance : 53.31
__
_____
C
peak time of C : 5.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.83 0.3 8.53 -0.298 0.61 2.61 -0.589 -12.8 0.165 5.77 999.8 272 -- --
43.13 0.308 8.39 0.472 0.614 0.291 -0.573 -- 0.163 5.69 999.8 272 -- --
41.65 0.301 8.53 -0.288 0.608 2.61 -- -12.8 0.168 5.89 999.7 259 -- --
43.55 0.307 8.39 0.468 0.612 0.34 -- -- 0.166 5.83 999.6 165 -- --
60.73 0.363 8.53 -0.204 -- 2.62 -- -12.8 0.177 -- 999.2 239 -- --
45.38 0.316 8.4 0.523 0.612 -- -0.58 -- 0.144 5.73 -- -- -- --
46.18 0.318 8.4 0.52 0.609 -- -- -- 0.147 5.84 -- -- -- --
62.34 0.368 8.4 0.508 -- 0.752 -- -- 0.167 -- 997.4 1158 -- --
49.14 0.326 8.4 -- 0.621 0.419 -- -- 0.121 5.79 999.6 194 -- --
65.4 0.378 8.41 0.539 -- -- -- -- 0.161 -- -- -- -- --
53.31 0.342 8.41 -- 0.617 -- -- -- 0.0891 5.8 -- -- -- --
68.77 0.386 8.41 -- -- 0.429 -- -- 0.133 -- 999.5 59 -- --
73.06 0.399 8.42 -- -- -- -- -- 0.101 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.15 wind 7 14400 > th dose independent rect. 11 1
2 38.17 wind 7 14400 < th dose independent rect. 11 1
4 38.37 wind 7 14400 > th dose dependent rect. 10 1
7 38.59 wind 7 14400 > th dose dependent rect. 5 8
11 38.68 wind 7 14400 > th dose dependent rect. 7 6
18 38.86 wind 9 14400 < th dose independent rect. 22 16
26 39.05 temperature 25 4320 < th dose independent rect. 2 1
36 39.17 wind 9 14400 > th dose dependent rect. 22 16
39 39.20 atmosphere 1005 14400 > th dose independent rect. 11 1
40 39.20 wind 9 14400 > th dose independent rect. 7 4
41 39.20 wind 9 14400 > th dose independent rect. 22 16
45 39.21 wind 7 14400 > th dose dependent rect. 24 14
59 39.29 wind 9 14400 < th dose independent rect. 3 11
71 39.38 wind 7 14400 > th dose independent rect. 5 8
74 39.40 wind 9 14400 < th dose independent rect. 7 4
77 39.42 temperature 25 4320 > th dose independent rect. 24 1
88 39.47 wind 9 14400 < th dose independent rect. 7 7
90 39.48 atmosphere 1005 14400 < th dose independent rect. 11 1
95 39.51 temperature 25 720 > th dose dependent rect. 16 7
120 39.71 wind 9 14400 > th dose independent rect. 3 11
125 39.73 temperature 25 720 > th dose dependent rect. 16 16
126 39.74 wind 9 14400 < th dose independent sin 6 NA
153 39.82 wind 1 43200 > th dose independent rect. 2 1
161 39.86 wind 9 14400 > th dose independent sin 6 NA
185 39.99 wind 9 14400 > th dose dependent sin 6 NA
189 40.01 wind 9 14400 > th dose independent rect. 19 19
191 40.02 temperature 20 4320 > th dose independent rect. 21 2
195 40.03 atmosphere 1005 14400 < th dose independent rect. 23 1
199 40.05 humidity 90 14400 > th dose independent rect. 2 6
202 40.05 temperature 20 10 > th dose dependent sin 10 NA
203 40.06 humidity 80 14400 > th dose independent rect. 4 1
220 40.10 temperature 20 10 > th dose dependent rect. 17 10
233 40.14 humidity 80 14400 < th dose independent rect. 4 1
237 40.15 wind 1 43200 < th dose independent rect. 2 1
240 40.16 temperature 20 4320 < th dose independent rect. 21 2
254 40.18 wind 9 14400 < th dose independent rect. 19 19
256 40.18 temperature 25 720 > th dose dependent sin 12 NA
257 40.18 humidity 80 14400 < th dose dependent rect. 5 1
295 40.25 atmosphere 1005 14400 > th dose independent rect. 2 12
303 40.26 temperature 25 270 > th dose independent rect. 17 15
304 40.26 atmosphere 1005 14400 > th dose independent rect. 2 16
312 40.27 atmosphere 1005 14400 < th dose independent rect. 11 18
317 40.28 wind 3 43200 < th dose independent rect. 12 1
326 40.29 atmosphere 1005 14400 > th dose independent sin 2 NA
348 40.31 wind 1 43200 < th dose independent rect. 23 3
356 40.31 wind 3 43200 < th dose dependent rect. 11 1
360 40.32 atmosphere 1005 14400 < th dose independent rect. 3 1
365 40.32 atmosphere 1005 14400 < th dose independent rect. 11 13
368 40.32 temperature 15 4320 > th dose dependent rect. 23 1
390 40.34 atmosphere 1005 14400 < th dose independent rect. 8 6
405 40.34 atmosphere 1005 14400 < th dose independent rect. 21 21
408 40.35 atmosphere 1005 14400 > th dose independent rect. 4 1
417 40.35 atmosphere 1005 14400 < th dose independent rect. 2 16
423 40.35 atmosphere 1005 14400 < th dose independent rect. 8 21
425 40.35 atmosphere 1005 14400 < th dose independent rect. 11 22
428 40.35 temperature 30 4320 < th dose dependent rect. 23 1
478 40.38 atmosphere 1005 14400 < th dose independent rect. 7 11
499 40.38 atmosphere 1005 14400 < th dose independent rect. 2 22
506 40.39 atmosphere 1005 14400 < th dose independent rect. 8 9
516 40.39 atmosphere 1005 14400 < th dose independent rect. 8 16
522 40.39 atmosphere 1005 14400 < th dose independent rect. 16 22
531 40.39 temperature 15 4320 > th dose dependent rect. 21 5
563 40.40 temperature 25 4320 < th dose dependent rect. 21 1
568 40.41 atmosphere 1005 14400 < th dose independent sin 0 NA
570 40.41 atmosphere 1005 14400 > th dose independent rect. 2 3
600 40.42 atmosphere 1005 14400 < th dose independent no NA NA
606 40.42 atmosphere 1005 14400 < th dose independent rect. 16 13
618 40.42 atmosphere 1005 14400 > th dose independent rect. 16 22
632 40.42 temperature 20 10 > th dose dependent rect. 16 20
671 40.43 temperature 30 4320 < th dose dependent rect. 21 4
712 40.44 temperature 10 4320 > th dose dependent rect. 21 1
724 40.45 atmosphere 1005 14400 < th dose independent sin 16 NA
754 40.45 atmosphere 1005 14400 > th dose independent rect. 8 21
778 40.45 wind 9 14400 > th dose dependent rect. 19 19
787 40.46 temperature 25 270 > th dose independent rect. 16 9
820 40.47 humidity 90 14400 < th dose independent rect. 2 6
824 40.47 humidity 90 14400 < th dose independent rect. 24 9
858 40.48 atmosphere 1005 14400 < th dose independent rect. 21 7
888 40.48 wind 1 14400 < th dose dependent rect. 2 1
899 40.49 atmosphere 1005 14400 > th dose independent no NA NA
905 40.49 atmosphere 1005 14400 < th dose independent rect. 16 8
930 40.49 atmosphere 1005 14400 > th dose independent rect. 11 23
961 40.50 atmosphere 1005 14400 < th dose independent rect. 16 17
972 40.50 atmosphere 1005 14400 > th dose independent rect. 4 23