Os10g0213700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0213700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.47 | 0.344 | 13.1 | -0.636 | 0.839 | 1.04 | -0.551 | -2.38 | -0.669 | 0.954 | 24.73 | 15 | -- | -- |
| 55.66 | 0.35 | 13.1 | -0.358 | 0.814 | 0.833 | -0.257 | -- | -0.624 | 0.844 | 23.2 | 18 | -- | -- |
| 54.51 | 0.344 | 13.1 | -0.541 | 0.841 | 1.02 | -- | -1.71 | -0.647 | 1.04 | 24.72 | 14 | -- | -- |
| 55.79 | 0.348 | 13.1 | -0.353 | 0.82 | 0.855 | -- | -- | -0.628 | 0.957 | 23.35 | 12 | -- | -- |
| 63.39 | 0.371 | 13.2 | -0.791 | -- | 1.12 | -- | -1.52 | -0.77 | -- | 16.1 | 912 | -- | -- |
| 66.52 | 0.382 | 13.1 | -0.215 | 0.543 | -- | -0.46 | -- | -0.505 | 23.7 | -- | -- | -- | -- |
| 67.43 | 0.385 | 13.1 | -0.197 | 0.545 | -- | -- | -- | -0.503 | 23.8 | -- | -- | -- | -- |
| 65.5 | 0.377 | 13.1 | -0.487 | -- | 1.13 | -- | -- | -0.676 | -- | 14.58 | 897 | -- | -- |
| 58.66 | 0.357 | 13.1 | -- | 0.789 | 0.79 | -- | -- | -0.546 | 0.891 | 24.62 | 12 | -- | -- |
| 86.1 | 0.434 | 13.1 | -0.181 | -- | -- | -- | -- | -0.496 | -- | -- | -- | -- | -- |
| 68.45 | 0.387 | 13.1 | -- | 0.542 | -- | -- | -- | -0.481 | 23.8 | -- | -- | -- | -- |
| 71.17 | 0.393 | 13.1 | -- | -- | 0.939 | -- | -- | -0.597 | -- | 13.96 | 888 | -- | -- |
| 86.96 | 0.435 | 13.1 | -- | -- | -- | -- | -- | -0.476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.57 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 2 | 48.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 5 | 48.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 28 | 49.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 29 | 49.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 58 | 50.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 137 | 50.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 13 |
| 164 | 51.23 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 177 | 51.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 6 |
| 212 | 51.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 289 | 52.01 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 5 |
| 456 | 52.94 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 507 | 53.12 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 524 | 53.17 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 534 | 53.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 565 | 53.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 573 | 53.35 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 8 |
| 625 | 53.47 | temperature | 25 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 698 | 53.63 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 699 | 53.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 706 | 53.63 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 22 |
| 805 | 53.77 | temperature | 25 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 818 | 53.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 978 | 53.97 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |