Os10g0212100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0212100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.13 | 0.336 | 10.3 | -1.89 | 0.294 | 0.652 | 0.0723 | -2.06 | -0.11 | 11 | 79 | 1467 | -- | -- |
| 54.5 | 0.344 | 10.3 | -1.73 | 0.313 | 0.502 | 0.0285 | -- | -0.0858 | 10.8 | 79 | 1490 | -- | -- |
| 51.15 | 0.333 | 10.3 | -1.88 | 0.294 | 0.649 | -- | -2.05 | -0.109 | 11 | 79 | 1466 | -- | -- |
| 54.4 | 0.344 | 10.3 | -1.72 | 0.314 | 0.518 | -- | -- | -0.0755 | 11.3 | 78.64 | 1438 | -- | -- |
| 56.2 | 0.349 | 10.3 | -1.9 | -- | 0.724 | -- | -2.23 | -0.115 | -- | 78.99 | 1502 | -- | -- |
| 57.54 | 0.356 | 10.3 | -1.7 | 0.321 | -- | -0.0484 | -- | -0.0527 | 11.3 | -- | -- | -- | -- |
| 57.55 | 0.355 | 10.3 | -1.7 | 0.321 | -- | -- | -- | -0.0529 | 11.2 | -- | -- | -- | -- |
| 60.02 | 0.361 | 10.3 | -1.73 | -- | 0.593 | -- | -- | -0.0788 | -- | 78.7 | 1511 | -- | -- |
| 128.08 | 0.527 | 10.3 | -- | 0.535 | 0.539 | -- | -- | 0.0738 | 11.4 | 88 | 996 | -- | -- |
| 64 | 0.374 | 10.3 | -1.71 | -- | -- | -- | -- | -0.0558 | -- | -- | -- | -- | -- |
| 133.74 | 0.541 | 10.3 | -- | 0.339 | -- | -- | -- | 0.136 | 11.6 | -- | -- | -- | -- |
| 134.26 | 0.54 | 10.3 | -- | -- | 0.627 | -- | -- | 0.0503 | -- | 88.04 | 1592 | -- | -- |
| 140.96 | 0.554 | 10.3 | -- | -- | -- | -- | -- | 0.134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.36 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 3 | 48.37 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 4 | 48.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 103 | 49.42 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 120 | 49.46 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 9 |
| 155 | 49.59 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 166 | 49.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 15 |
| 250 | 49.76 | radiation | 10 | 1440 | < th | dose dependent | sin | 18 | NA |
| 283 | 50.02 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 285 | 50.06 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 296 | 50.08 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 313 | 50.11 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 371 | 50.23 | radiation | 1 | 1440 | < th | dose independent | sin | 19 | NA |
| 373 | 50.25 | radiation | 1 | 1440 | > th | dose independent | sin | 19 | NA |
| 376 | 50.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 432 | 50.44 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 509 | 50.60 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 521 | 50.63 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 16 |
| 528 | 50.64 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 530 | 50.64 | humidity | 80 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 551 | 50.67 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 560 | 50.68 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 584 | 50.70 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 587 | 50.70 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 891 | 51.14 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 934 | 51.19 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 989 | 51.35 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 22 |