Os10g0209300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haloacid dehalogenase/epoxide hydrolase family protein.
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Os10g0209300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Haloacid dehalogenase/epoxide hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.53 | 0.191 | 12.1 | -0.804 | 0.451 | -0.255 | -0.289 | 0.231 | -0.163 | 19.6 | 79.67 | 295 | -- | -- |
| 16.72 | 0.19 | 12.1 | -0.814 | 0.431 | -0.236 | -0.216 | -- | -0.167 | 19.6 | 79.71 | 278 | -- | -- |
| 16.75 | 0.191 | 12.1 | -0.793 | 0.437 | -0.244 | -- | 0.162 | -0.162 | 19.5 | 79.37 | 278 | -- | -- |
| 16.84 | 0.191 | 12.1 | -0.811 | 0.431 | -0.234 | -- | -- | -0.167 | 19.7 | 79.7 | 278 | -- | -- |
| 22.71 | 0.223 | 12.1 | -0.793 | -- | -0.16 | -- | 0.181 | -0.171 | -- | 74.01 | 874 | -- | -- |
| 18.66 | 0.203 | 12.1 | -0.82 | 0.341 | -- | -0.0957 | -- | -0.178 | 21.6 | -- | -- | -- | -- |
| 18.7 | 0.202 | 12.1 | -0.817 | 0.341 | -- | -- | -- | -0.178 | 21.7 | -- | -- | -- | -- |
| 22.91 | 0.224 | 12.1 | -0.801 | -- | -0.159 | -- | -- | -0.174 | -- | 74.01 | 874 | -- | -- |
| 33.76 | 0.271 | 12.1 | -- | 0.45 | -0.273 | -- | -- | -0.0823 | 19.2 | 77.79 | 258 | -- | -- |
| 25.6 | 0.236 | 12.1 | -0.814 | -- | -- | -- | -- | -0.178 | -- | -- | -- | -- | -- |
| 36.28 | 0.282 | 12.1 | -- | 0.34 | -- | -- | -- | -0.0869 | 21.5 | -- | -- | -- | -- |
| 39.41 | 0.293 | 12.1 | -- | -- | -0.182 | -- | -- | -0.0946 | -- | 77.79 | 258 | -- | -- |
| 43.07 | 0.306 | 12.1 | -- | -- | -- | -- | -- | -0.0881 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.63 | humidity | 80 | 90 | > th | dose independent | rect. | 6 | 13 |
| 7 | 15.87 | humidity | 70 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 10 | 15.90 | humidity | 80 | 270 | < th | dose independent | rect. | 21 | 19 |
| 18 | 15.98 | humidity | 80 | 90 | < th | dose independent | rect. | 9 | 8 |
| 36 | 16.08 | humidity | 80 | 90 | < th | dose independent | sin | 23 | NA |
| 41 | 16.11 | humidity | 80 | 270 | > th | dose independent | sin | 1 | NA |
| 49 | 16.13 | humidity | 80 | 90 | < th | dose independent | rect. | 1 | 16 |
| 53 | 16.14 | humidity | 80 | 270 | < th | dose independent | sin | 1 | NA |
| 64 | 16.16 | humidity | 80 | 90 | < th | dose independent | rect. | 3 | 14 |
| 124 | 16.29 | radiation | 10 | 270 | > th | dose independent | rect. | 7 | 9 |
| 137 | 16.31 | temperature | 25 | 30 | > th | dose dependent | rect. | 10 | 7 |
| 177 | 16.37 | humidity | 80 | 270 | > th | dose independent | rect. | 2 | 23 |
| 189 | 16.40 | radiation | 10 | 270 | > th | dose independent | sin | 1 | NA |
| 194 | 16.40 | humidity | 80 | 90 | < th | dose independent | rect. | 9 | 21 |
| 196 | 16.40 | humidity | 70 | 90 | > th | dose dependent | sin | 22 | NA |
| 230 | 16.46 | humidity | 80 | 270 | > th | dose independent | rect. | 21 | 21 |
| 234 | 16.46 | radiation | 20 | 270 | < th | dose dependent | rect. | 5 | 12 |
| 300 | 16.51 | humidity | 70 | 30 | > th | dose dependent | rect. | 6 | 19 |
| 313 | 16.52 | humidity | 80 | 270 | > th | dose independent | rect. | 11 | 23 |
| 320 | 16.53 | humidity | 80 | 90 | < th | dose independent | rect. | 9 | 14 |
| 339 | 16.54 | humidity | 80 | 30 | > th | dose independent | rect. | 6 | 19 |
| 369 | 16.56 | humidity | 80 | 270 | < th | dose independent | rect. | 5 | 22 |
| 372 | 16.56 | humidity | 80 | 270 | < th | dose independent | rect. | 1 | 23 |
| 382 | 16.57 | humidity | 80 | 270 | < th | dose independent | no | NA | NA |
| 390 | 16.58 | radiation | 10 | 270 | > th | dose independent | no | NA | NA |
| 512 | 16.60 | humidity | 80 | 270 | > th | dose independent | no | NA | NA |
| 563 | 16.63 | radiation | 20 | 30 | < th | dose dependent | rect. | 6 | 19 |
| 572 | 16.64 | radiation | 10 | 270 | > th | dose independent | rect. | 15 | 23 |
| 630 | 16.67 | temperature | 25 | 10 | > th | dose independent | rect. | 10 | 7 |
| 671 | 16.68 | temperature | 15 | 30 | > th | dose dependent | rect. | 10 | 14 |
| 698 | 16.70 | humidity | 80 | 30 | > th | dose independent | rect. | 6 | 21 |
| 772 | 16.74 | humidity | 80 | 270 | > th | dose independent | rect. | 15 | 23 |
| 792 | 16.75 | humidity | 80 | 270 | > th | dose independent | rect. | 8 | 23 |
| 798 | 16.75 | humidity | 60 | 30 | > th | dose dependent | rect. | 6 | 6 |
| 846 | 16.77 | wind | 1 | 30 | > th | dose independent | rect. | 10 | 20 |
| 860 | 16.77 | temperature | 10 | 30 | > th | dose dependent | rect. | 10 | 20 |
| 910 | 16.79 | radiation | 20 | 270 | < th | dose dependent | sin | 0 | NA |
| 921 | 16.79 | humidity | 90 | 270 | < th | dose dependent | rect. | 19 | 21 |
| 935 | 16.80 | radiation | 20 | 30 | < th | dose independent | rect. | 6 | 19 |
| 977 | 16.82 | humidity | 80 | 10 | < th | dose independent | rect. | 10 | 14 |
| 999 | 16.83 | humidity | 80 | 10 | < th | dose independent | rect. | 10 | 12 |