Os10g0208500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0208500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.11 | 0.456 | 6.11 | -1.62 | 0.464 | 0.408 | -1.08 | 2.04 | 0.165 | 0.234 | 20.8 | 1379 | -- | -- |
| 101.57 | 0.469 | 6.18 | -2.04 | 0.453 | 0.242 | -0.931 | -- | 0.0453 | 0.377 | 22.2 | 2131 | -- | -- |
| 98.55 | 0.462 | 6.1 | -1.51 | 0.481 | 0.378 | -- | 2.19 | 0.19 | 0.449 | 20.8 | 1615 | -- | -- |
| 103.24 | 0.473 | 6.2 | -2 | 0.489 | 0.288 | -- | -- | 0.0177 | 1.05 | 22 | 571 | -- | -- |
| 112.72 | 0.494 | 6.09 | -1.56 | -- | 0.388 | -- | 2.03 | 0.183 | -- | 20.8 | 1569 | -- | -- |
| 103.16 | 0.476 | 6.16 | -1.97 | 0.473 | -- | -0.975 | -- | 0.12 | 0.245 | -- | -- | -- | -- |
| 107.04 | 0.485 | 6.16 | -1.93 | 0.481 | -- | -- | -- | 0.123 | 0.766 | -- | -- | -- | -- |
| 114.87 | 0.499 | 6.18 | -2.05 | -- | 0.394 | -- | -- | 0.00334 | -- | 22.1 | 854 | -- | -- |
| 129.47 | 0.53 | 5.98 | -- | 0.54 | -1.31 | -- | -- | 0.781 | 23.6 | 19.71 | 26023 | -- | -- |
| 121.53 | 0.515 | 6.15 | -1.91 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 205.16 | 0.67 | 6.11 | -- | 0.452 | -- | -- | -- | 0.338 | 0.57 | -- | -- | -- | -- |
| 135.9 | 0.543 | 6.02 | -- | -- | -1.47 | -- | -- | 0.679 | -- | 18.07 | 47520 | -- | -- |
| 217.96 | 0.689 | 6.1 | -- | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.55 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 3 | 87.71 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 87.91 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 6 | 87.93 | humidity | 80 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 7 | 88.05 | humidity | 80 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 25 | 88.44 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 26 | 88.44 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 28 | 88.45 | wind | 9 | 14400 | > th | dose independent | rect. | 22 | 16 |
| 31 | 88.54 | humidity | 80 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 37 | 88.64 | humidity | 80 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 46 | 88.80 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 52 | 88.85 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 56 | 88.87 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 57 | 88.87 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 68 | 88.98 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 70 | 89.01 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 75 | 89.05 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 83 | 89.20 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 87 | 89.26 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 96 | 89.38 | humidity | 80 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 109 | 89.57 | humidity | 80 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 113 | 89.60 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 122 | 89.65 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 123 | 89.67 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 133 | 89.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 157 | 90.06 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 164 | 90.13 | wind | 9 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 165 | 90.14 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 166 | 90.15 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 174 | 90.25 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 177 | 90.30 | wind | 9 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 180 | 90.33 | wind | 9 | 14400 | > th | dose dependent | sin | 6 | NA |
| 197 | 90.52 | wind | 9 | 14400 | < th | dose independent | sin | 5 | NA |
| 198 | 90.52 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 209 | 90.60 | wind | 9 | 14400 | > th | dose independent | sin | 6 | NA |
| 216 | 90.65 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 227 | 90.73 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 228 | 90.74 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 232 | 90.77 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 270 | 91.01 | wind | 9 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 326 | 91.30 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 341 | 91.36 | temperature | 25 | 90 | < th | dose independent | sin | 13 | NA |
| 370 | 91.45 | wind | 3 | 14400 | < th | dose independent | sin | 5 | NA |
| 380 | 91.47 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 11 | 23 |
| 383 | 91.48 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 395 | 91.53 | temperature | 15 | 270 | > th | dose dependent | sin | 12 | NA |
| 403 | 91.56 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 10 |
| 405 | 91.56 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 408 | 91.58 | wind | 3 | 14400 | > th | dose independent | sin | 5 | NA |
| 436 | 91.66 | wind | 9 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 440 | 91.67 | wind | 3 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 449 | 91.69 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 451 | 91.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 11 |
| 490 | 91.78 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 499 | 91.81 | wind | 3 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 524 | 91.86 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 12 |
| 525 | 91.86 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 13 |
| 538 | 91.89 | wind | 9 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 553 | 91.94 | temperature | 20 | 90 | > th | dose dependent | sin | 6 | NA |
| 567 | 91.96 | temperature | 20 | 270 | > th | dose dependent | sin | 9 | NA |
| 581 | 92.00 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 608 | 92.07 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 684 | 92.22 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 696 | 92.24 | temperature | 25 | 270 | > th | dose independent | rect. | 18 | 15 |
| 757 | 92.35 | wind | 1 | 14400 | > th | dose dependent | sin | 5 | NA |
| 780 | 92.39 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 802 | 92.42 | wind | 5 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 830 | 92.45 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 874 | 92.51 | wind | 9 | 14400 | < th | dose dependent | sin | 5 | NA |
| 896 | 92.52 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 22 |
| 917 | 92.54 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 935 | 92.57 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 988 | 92.65 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 2 |