Os10g0204300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphoenolpyruvate carboxykinase.
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Os10g0204300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphoenolpyruvate carboxykinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.85 | 0.304 | 10.4 | -0.228 | 0.596 | 0.335 | 0.332 | 1.69 | 0.571 | 4.44 | 5.261e-06 | 4650 | -- | -- |
| 41.01 | 0.298 | 10.4 | -0.236 | 0.591 | 0.691 | 0.374 | -- | 0.611 | 4.36 | 0.4464 | 17246 | -- | -- |
| 42.14 | 0.302 | 10.4 | -0.233 | 0.598 | 0.339 | -- | 1.7 | 0.57 | 4.43 | -0.002705 | 4618 | -- | -- |
| 41.37 | 0.3 | 10.4 | -0.284 | 0.618 | 0.679 | -- | -- | 0.612 | 4.33 | 0.4552 | 17275 | -- | -- |
| 61.28 | 0.365 | 10.4 | -0.214 | -- | 0.322 | -- | 1.86 | 0.583 | -- | -0.07203 | 4649 | -- | -- |
| 51.4 | 0.336 | 10.4 | -0.0363 | 0.605 | -- | 0.448 | -- | 0.525 | 4.37 | -- | -- | -- | -- |
| 51.95 | 0.338 | 10.5 | -0.0402 | 0.607 | -- | -- | -- | 0.523 | 4.37 | -- | -- | -- | -- |
| 61.59 | 0.366 | 10.4 | -0.289 | -- | 0.694 | -- | -- | 0.618 | -- | 0.472 | 19684 | -- | -- |
| 42.89 | 0.305 | 10.4 | -- | 0.614 | 0.602 | -- | -- | 0.648 | 4.33 | 0.3717 | 16917 | -- | -- |
| 71.77 | 0.396 | 10.5 | -0.0162 | -- | -- | -- | -- | 0.539 | -- | -- | -- | -- | -- |
| 51.99 | 0.337 | 10.4 | -- | 0.607 | -- | -- | -- | 0.527 | 4.37 | -- | -- | -- | -- |
| 63.05 | 0.37 | 10.4 | -- | -- | 0.6 | -- | -- | 0.652 | -- | 0.4067 | 16847 | -- | -- |
| 71.78 | 0.395 | 10.5 | -- | -- | -- | -- | -- | 0.541 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 41.16 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 4 | 41.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 5 | 41.23 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 21 | NA |
| 6 | 41.23 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 21 | NA |
| 7 | 41.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 8 | 41.23 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 21 | NA |
| 12 | 41.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 13 | 41.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 14 | 41.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 15 | 41.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 27 | 41.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 28 | 41.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 12 |
| 44 | 41.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 18 |
| 45 | 41.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 18 |
| 46 | 41.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 18 |
| 48 | 41.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 49 | 41.35 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 50 | 41.35 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 16 |
| 76 | 41.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 92 | 41.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 99 | 41.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 151 | 41.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 16 |
| 155 | 41.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 16 |
| 169 | 41.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 14 |
| 178 | 41.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 14 |
| 194 | 41.49 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 202 | 41.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 218 | 41.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 272 | 41.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 303 | 41.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 22 |
| 310 | 41.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 316 | 41.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 319 | 41.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 320 | 41.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 322 | 41.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 18 |
| 332 | 41.59 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 3 | NA |
| 337 | 41.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 349 | 41.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 357 | 41.62 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 20 |
| 362 | 41.62 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 20 |
| 363 | 41.63 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 424 | 41.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 21 |
| 425 | 41.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 22 |
| 428 | 41.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 438 | 41.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 18 |
| 463 | 41.68 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 489 | 41.69 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 495 | 41.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 534 | 41.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 535 | 41.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 559 | 41.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 9 |
| 578 | 41.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 597 | 41.77 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 754 | 41.88 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 17 | NA |
| 777 | 41.89 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 787 | 41.90 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 14 |
| 937 | 42.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 19 |
| 945 | 42.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 19 |
| 949 | 42.03 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 963 | 42.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 974 | 42.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 985 | 42.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 21 |