Os10g0198100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0198100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.96 | 0.587 | 5.93 | -3.26 | 0.339 | 2.01 | -0.704 | -1.82 | -0.715 | 17.9 | 25.47 | 1307 | -- | -- |
| 156.63 | 0.583 | 5.88 | -2.79 | 0.345 | 1.89 | -0.724 | -- | -0.643 | 17.7 | 25.01 | 1275 | -- | -- |
| 156.8 | 0.583 | 5.92 | -3.17 | 0.35 | 1.98 | -- | -1.48 | -0.709 | 18.7 | 25.35 | 1307 | -- | -- |
| 157.58 | 0.585 | 5.89 | -2.8 | 0.348 | 1.88 | -- | -- | -0.66 | 18.7 | 24.92 | 1308 | -- | -- |
| 162.59 | 0.594 | 5.92 | -3.2 | -- | 2 | -- | -1.74 | -0.697 | -- | 25.6 | 1234 | -- | -- |
| 287.22 | 0.795 | 5.84 | -2.17 | 0.368 | -- | 0.582 | -- | -0.432 | 22.6 | -- | -- | -- | -- |
| 288.22 | 0.795 | 5.84 | -2.19 | 0.38 | -- | -- | -- | -0.432 | 21.7 | -- | -- | -- | -- |
| 163.59 | 0.596 | 5.87 | -2.77 | -- | 1.91 | -- | -- | -0.631 | -- | 25.16 | 1189 | -- | -- |
| 343.63 | 0.863 | 5.75 | -- | 0.348 | 1.2 | -- | -- | -0.0466 | 19.3 | 28.5 | 1290 | -- | -- |
| 296.82 | 0.805 | 5.83 | -2.18 | -- | -- | -- | -- | -0.432 | -- | -- | -- | -- | -- |
| 414.1 | 0.952 | 5.78 | -- | 0.377 | -- | -- | -- | -0.188 | 21.3 | -- | -- | -- | -- |
| 349.7 | 0.871 | 5.75 | -- | -- | 1.21 | -- | -- | -0.0747 | -- | 28.3 | 1234 | -- | -- |
| 422.4 | 0.959 | 5.77 | -- | -- | -- | -- | -- | -0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 3 | 157.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 12 | 158.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 17 |
| 23 | 158.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 42 | 158.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 47 | 158.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 75 | 158.48 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 88 | 158.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 112 | 158.74 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 340 | 162.53 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 343 | 162.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 352 | 162.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 353 | 162.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 355 | 162.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 358 | 162.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 372 | 163.36 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 381 | 163.64 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 402 | 163.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 413 | 164.06 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 433 | 164.22 | temperature | 30 | 1440 | < th | dose independent | sin | 1 | NA |
| 449 | 164.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 451 | 164.52 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 453 | 164.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 472 | 164.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 497 | 164.76 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 498 | 164.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 22 |
| 503 | 164.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 504 | 164.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 505 | 164.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 526 | 164.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 21 |
| 530 | 164.82 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 630 | 165.00 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 635 | 165.04 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 643 | 165.12 | temperature | 30 | 1440 | > th | dose independent | sin | 0 | NA |
| 713 | 165.60 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 832 | 165.83 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 875 | 166.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 898 | 166.30 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 994 | 167.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |