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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0186200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pectinesterase inhibitor domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.18 (0.0532) R2 : 0.362
β1 : 0.75 (0.194) R2dD : 0.022 R2D : 0.024
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.85 (0.182) R2dE : 0.154 R2E : 0.164
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -8.9 (0.816) R2dD*E : 0.169 R2D*E : 0.165
γ1 : -0.21 (0.117) R2dN8 : 0.00659 R2N8 : 0.0163
σ : 0.985
deviance : 447.15
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_____
C
peak time of C : --
E
wheather : wind
threshold : 6.762
memory length : 4323
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 19
open length of G : 2.06

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
438.41 0.984 3.19 0.742 0.217 -1.79 1.33 -8.69 -0.22 14.5 6.7 4321 19.1 2.01
493.42 1.03 3.17 0.472 0.228 -2.41 1.9 -- -0.189 13.2 7.775 4318 19.1 1.98
444.4 0.982 3.18 0.787 0.228 -1.9 -- -8.88 -0.209 14.9 6.743 4323 19 2.05
474.85 1.01 3.17 0.355 0.191 -2.49 -- -- -0.134 13.1 8.798 4319 19 1.9
447.15 0.985 3.18 0.75 -- -1.85 -- -8.9 -0.21 -- 6.762 4323 19 2.06
661.26 1.21 3.21 0.673 0.266 -- 1.34 -- -0.367 13.9 -- -- -- --
668.08 1.21 3.21 0.714 0.274 -- -- -- -0.359 14.5 -- -- -- --
475.11 1.02 3.17 0.397 -- -2.72 -- -- -0.102 -- 8.79 4319 19 1.9
473.21 1.01 3.17 -- 0.0835 -2.79 -- -- -0.172 12.8 8.8 4319 19 1.84
672.47 1.21 3.21 0.703 -- -- -- -- -0.365 -- -- -- -- --
681.52 1.22 3.22 -- 0.26 -- -- -- -0.438 14.5 -- -- -- --
470.82 1.01 3.17 -- -- -3.2 -- -- -0.194 -- 8.818 4319 18.9 1.57
685.49 1.22 3.22 -- -- -- -- -- -0.443 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 443.37 wind 5 4320 > th dose dependent rect. 20 3
4 448.27 wind 7 4320 < th dose independent rect. 19 2
13 451.94 wind 9 4320 > th dose dependent rect. 20 1
20 452.07 wind 9 4320 > th dose dependent rect. 19 7
30 452.68 wind 9 4320 > th dose independent rect. 20 1
36 452.96 wind 9 4320 < th dose independent rect. 19 8
43 453.58 wind 9 4320 > th dose independent rect. 19 7
120 461.12 humidity 90 1440 < th dose dependent rect. 2 5
138 463.46 humidity 90 1440 < th dose dependent rect. 3 1
149 465.96 atmosphere 995 14400 > th dose independent rect. 17 2
150 465.97 atmosphere 995 14400 < th dose independent rect. 17 1
151 465.97 atmosphere 995 14400 < th dose dependent rect. 17 1
191 471.57 humidity 90 1440 < th dose dependent rect. 5 2
251 477.24 atmosphere 995 14400 > th dose independent rect. 7 12
346 482.54 temperature 20 720 < th dose independent rect. 18 1
354 483.41 humidity 80 1440 > th dose independent rect. 6 1
356 483.46 temperature 20 720 < th dose independent rect. 16 4
392 485.85 humidity 80 1440 < th dose independent rect. 22 2
449 488.96 atmosphere 995 14400 > th dose independent rect. 18 22
451 489.04 atmosphere 995 14400 > th dose independent rect. 24 16
452 489.06 atmosphere 995 14400 < th dose independent rect. 18 22
458 489.13 atmosphere 995 14400 < th dose independent rect. 1 15
473 489.26 humidity 70 1440 > th dose dependent rect. 1 6
490 489.65 wind 7 4320 > th dose independent rect. 8 1
494 489.82 atmosphere 995 14400 > th dose independent sin 22 NA
499 489.96 atmosphere 995 14400 < th dose independent sin 22 NA
501 490.01 atmosphere 995 14400 > th dose independent sin 4 NA
503 490.13 humidity 70 1440 > th dose dependent rect. 24 8
543 490.65 atmosphere 995 14400 < th dose independent sin 4 NA
551 490.68 atmosphere 995 14400 < th dose dependent sin 1 NA
571 490.96 humidity 80 720 < th dose dependent rect. 21 2
600 491.45 atmosphere 995 14400 < th dose dependent rect. 4 19
668 491.86 temperature 20 1440 > th dose independent rect. 18 1
695 492.09 atmosphere 995 14400 > th dose independent rect. 8 20
699 492.10 atmosphere 995 14400 > th dose independent rect. 6 21
727 492.15 atmosphere 995 14400 > th dose independent rect. 10 18
730 492.15 atmosphere 995 14400 > th dose independent rect. 22 23
731 492.16 atmosphere 995 14400 > th dose independent no NA NA
740 492.16 atmosphere 995 14400 > th dose independent rect. 10 23
744 492.17 atmosphere 995 14400 > th dose independent rect. 2 23
745 492.17 atmosphere 995 14400 > th dose independent rect. 12 23
746 492.17 atmosphere 995 14400 > th dose independent rect. 14 23
748 492.17 atmosphere 995 14400 > th dose independent rect. 24 23
751 492.18 atmosphere 995 14400 > th dose independent rect. 24 21
890 492.89 atmosphere 995 14400 < th dose independent no NA NA
896 492.89 atmosphere 995 14400 < th dose independent rect. 14 15
939 492.89 atmosphere 995 14400 < th dose independent rect. 1 23