BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0186200 Os10g0186200|Os10g0186200
(244 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62760.1 | chr1:23237574-23238512 REVERSE LENGTH=313 63 1e-10
AT1G14890.1 | chr1:5137045-5137704 FORWARD LENGTH=220 62 2e-10
AT2G01610.1 | chr2:274124-274792 REVERSE LENGTH=223 61 5e-10
AT1G23205.1 | chr1:8234234-8234851 REVERSE LENGTH=206 60 1e-09
AT4G25250.1 | chr4:12934632-12935231 FORWARD LENGTH=200 55 4e-08
AT5G62360.1 | chr5:25040699-25041310 FORWARD LENGTH=204 55 4e-08
AT5G51520.1 | chr5:20925980-20926594 FORWARD LENGTH=205 54 5e-08
AT1G62770.1 | chr1:23246085-23246836 REVERSE LENGTH=205 54 8e-08
AT1G70720.1 | chr1:26666427-26667029 FORWARD LENGTH=201 53 2e-07
AT4G25260.1 | chr4:12936005-12936610 REVERSE LENGTH=202 52 2e-07
AT5G62350.1 | chr5:25037504-25038112 FORWARD LENGTH=203 51 6e-07
AT3G47670.1 | chr3:17575019-17575849 REVERSE LENGTH=277 47 9e-06
AT3G47380.1 | chr3:17457795-17458403 FORWARD LENGTH=203 47 9e-06
>AT1G62760.1 | chr1:23237574-23238512 REVERSE LENGTH=313
Length = 312
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTARAKELVAHGV 134
+++ SC TLY+ CY++L P +++ KLA A ++ +S K+ + K ++HG
Sbjct: 147 YIKTSCNITLYKTICYNSLSPYASTIRSNPQKLAVIALNLTLSSAKSASKFVKN-ISHG- 204
Query: 135 PGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSNAKTWLSA 194
G + DC +++ EL ++ D+AK +S+ +TW+SA
Sbjct: 205 GGLTRLEVVAVADCVEEIGDSVTSLQDSIRELDSIN-YKDSAK---FEMVMSDVETWVSA 260
Query: 195 AMTNEANCADALSSTGAAVSPAARELIAGVVMAKQYTSIALSFVN 239
A+TN+ C D S AV R VV + TS AL+ +N
Sbjct: 261 ALTNDDTCMDGFSLVKTAVKDLVRR---HVVEVARLTSNALALIN 302
>AT1G14890.1 | chr1:5137045-5137704 FORWARD LENGTH=220
Length = 219
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTARAKELVAHGV 134
F+R SC +TLY CY +L A Q + +LA+ A V+ +RAK A+
Sbjct: 58 FIRTSCNTTLYPDVCYTSLAGYASAVQDNPARLAKLAIGVSL-------SRAKYTAAYLS 110
Query: 135 PGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQA-RWAVSNAKTWLS 193
A +A + DC + L +L M G A R+ +SN +TW+S
Sbjct: 111 KLSRRAASAAVHDCVSNVGDAVDQMR---GSLRQLREMNHRRPGDPAFRFQMSNVQTWMS 167
Query: 194 AAMTNEANCADALSS--TGAAVSPAARELIAGVVMAKQYTSIALSFVNT 240
AA+T+E C D ++ A + +A V K++TS AL+ VNT
Sbjct: 168 AALTDEETCTDGVTEEMEDGETKTAICDRVADV---KRFTSNALALVNT 213
>AT2G01610.1 | chr2:274124-274792 REVERSE LENGTH=223
Length = 222
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTARAKEL--VAH 132
F+R SC +TLY C+ +L A Q S +LA+ A V+ + K+ A +L A
Sbjct: 44 FIRTSCNATLYPDVCFTSLSGYASAVQDSPARLAKLAIGVSLSQAKSTAAFLSKLSRSAA 103
Query: 133 GVPGEAPAIA-AEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQA----RWAVSN 187
G+ A A IRDC + + +L ++ G ++ R+ +SN
Sbjct: 104 KYSGDGHQTASAVIRDCVSNVEDAVDEMRGSLRQLRDMNGRGGGTAARRSVETFRFQMSN 163
Query: 188 AKTWLSAAMTNEANCADALS--STGAAVSPAARELIAGVVMAKQYTSIALSFVNT 240
+TW+SAA+T+E C D G + + + V K+ TS AL+ VNT
Sbjct: 164 VQTWMSAALTDEDTCTDGFEDMDEGGLIKTTVCDRLEEV---KRLTSNALALVNT 215
>AT1G23205.1 | chr1:8234234-8234851 REVERSE LENGTH=206
Length = 205
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 72/172 (41%), Gaps = 14/172 (8%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVN-------AASLKNLTARAK 127
F+R SC +TLY C+ +L + LARAA V A+ L N+T
Sbjct: 33 FIRTSCNTTLYPDLCFSSLSSFSSSVHNDPALLARAAISVTLTKTLDLASYLANITTLQP 92
Query: 128 ELVAHGVPGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSN 187
E G P AA DC K + ++ L + G R+ +SN
Sbjct: 93 ESNEDG--AHHPTAAAVFHDCFDNLKDAVEEMKGSMKQMRELVSTGSL---ESFRFQMSN 147
Query: 188 AKTWLSAAMTNEANCADALSSTGAAVSPAARELIAGVVMAKQYTSIALSFVN 239
+TWLSAA+T+E C D P ++ A V K+ TS AL+ VN
Sbjct: 148 VQTWLSAALTDEETCTDGFKDIHD--EPRKDDICARVDDVKKMTSNALALVN 197
>AT4G25250.1 | chr4:12934632-12935231 FORWARD LENGTH=200
Length = 199
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 12/152 (7%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTARAKELVAHGV 134
+++ +C ST Y CY+ L ++ +KL + ++N S KN T L+
Sbjct: 37 YVKTACNSTTYPTMCYNCLSSYSSTIKSDPIKLCTTSLNLNVKSAKNATLVVSNLLQKAK 96
Query: 135 PGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSNAKTWLSA 194
++ ++ ++DC K+ AE+ + G + + N KTW+S+
Sbjct: 97 AAKSHEVSI-LKDCVDEMKDTIDELKQAVAEMKYVRGGGKTTEEH-----LKNVKTWVSS 150
Query: 195 AMTNEANCADALS------STGAAVSPAAREL 220
A+T+E C D T V A EL
Sbjct: 151 ALTDEGTCTDGFEEGRVNVETKKKVKKAISEL 182
>AT5G62360.1 | chr5:25040699-25041310 FORWARD LENGTH=204
Length = 203
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTARAKELVAHGV 134
F+++SC T Y C+ +L QTS +A AA ++ AS K +A L +
Sbjct: 43 FVKSSCTFTTYPRLCFSSLSTHASLIQTSPKLMAHAALNITLASAKVTSAMMVRLSNSRL 102
Query: 135 -PGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSNAKTWLS 193
P E A +RDC +++ E+ +L GS +S+ +TW+S
Sbjct: 103 KPKEVSA----MRDCVEELGDTLEELRKSIGEMCQLS-------GSNYEVYISDIQTWVS 151
Query: 194 AAMTNEANCADALSSTGAAVSPAARELIAG-VVMAKQYTSIALSFVN 239
AA+T+ C D G + + L+ G +++ TS AL+ +N
Sbjct: 152 AALTDVNTCTDGFE--GEDMDGKVKVLVRGRILVIAHLTSNALALIN 196
>AT5G51520.1 | chr5:20925980-20926594 FORWARD LENGTH=205
Length = 204
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTARAKELVAH-- 132
F++ +C ST Y CY +L ++ +KL A ++N S K T+ +L+
Sbjct: 37 FVKTACNSTTYPDKCYKSLSSYSSNIKSDPIKLCTTALNLNVKSAKEATSVVSKLLKMSQ 96
Query: 133 ----GVPGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSNA 188
G G+ A ++DC K+ E+ L G A+ ++N
Sbjct: 97 KSTAGRKGKMLPEALILKDCLEEMKDTIIELKQAITEMKNLQDGGSMAEH------ITNV 150
Query: 189 KTWLSAAMTNEANCADALSSTGAAVSPAARELIAGVV 225
+TW+S+A+T+E C D V+ ++ + VV
Sbjct: 151 RTWVSSALTDEGTCTDGFEE--VKVNKETKKKVNKVV 185
>AT1G62770.1 | chr1:23246085-23246836 REVERSE LENGTH=205
Length = 204
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 14/170 (8%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVK-LARAAADVNAASLKNLTARAKELVAHG 133
F+ +SC +T Y C L + + + LA+ A ++ A K++T +L
Sbjct: 33 FIVSSCQTTQYPSLCVHTLSAYATKIRHNNDQDLAQTALIISLARAKSVTIFVAKL---- 88
Query: 134 VPGEAPAIAAE----IRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSNAK 189
E P I+DC ++ ELAR G A W +SN +
Sbjct: 89 -TKETPKFKRREYLAIKDCIEVLGNSVDRLAQSVKELAR---AGHAVASEDFMWKMSNVQ 144
Query: 190 TWLSAAMTNEANCADALSSTGAAVSPAARELIAGVVMAKQYTSIALSFVN 239
TW+SAA+T+E C D S R + VV Q TS AL+ VN
Sbjct: 145 TWVSAALTDETTCLDGFSERAMG-GKVKRLIRYKVVHVAQVTSNALALVN 193
>AT1G70720.1 | chr1:26666427-26667029 FORWARD LENGTH=201
Length = 200
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTARAKELVAHGV 134
F+R +C +TLY C+ L + Q + +LAR A + + +L + + A+
Sbjct: 36 FIRLACNTTLYPDLCFSTLSSFANSIQNDSNRLARVAISLTLHNTLHLLSYLQN--AYNR 93
Query: 135 PGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGS--QARWAVSNAKTWL 192
P + RDC + + ++ L + A GS R+ +SN KTWL
Sbjct: 94 DHPTPVL----RDCFENLKDAVDGMRGSMKQMKELVS----ASGSIESFRFQMSNVKTWL 145
Query: 193 SAAMTNEANCADALSSTGAAVSPAARELIAGVVMAKQYTSIALSFVN 239
SAA+T+E C D S ++ + V K+ TS AL+ VN
Sbjct: 146 SAALTDEYTCTDGFKDVHEDDS-IKDDVCSRVDDVKKLTSNALALVN 191
>AT4G25260.1 | chr4:12936005-12936610 REVERSE LENGTH=202
Length = 201
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTARAKELVAH-G 133
F++ASC +T Y C+ +L + KLA A V+ A K+ E+ + G
Sbjct: 37 FIKASCETTSYPDRCFQSLSSYASEIKKQPRKLAETALAVSIARAKSAKTYVSEMTDYKG 96
Query: 134 VPGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSNAKTWLS 193
+ A DC + EL L+ GD+ G + +SN +TW S
Sbjct: 97 ITKRQHEAVA---DCLEEMGDTVDRLSNSLKELKHLEE-GDS--GEDFWFCLSNVRTWTS 150
Query: 194 AAMTNEANCADALSSTGAAVSPAARELI-AGVVMAKQYTSIALSFVN 239
AA+T+E C D G A++ + LI +V + TS AL+ +N
Sbjct: 151 AALTDETACMDGFG--GKAMAGELKSLIRTHIVSVAEETSNALALIN 195
>AT5G62350.1 | chr5:25037504-25038112 FORWARD LENGTH=203
Length = 202
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 70/169 (41%), Gaps = 14/169 (8%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADV---NAASLKNLTARAKELVA 131
F+++SC +T Y C +L QTS +LA A V A S K +R +
Sbjct: 38 FIQSSCKTTTYPALCVHSLSVYANDIQTSPKRLAETAIAVTLSRAQSTKLFVSRLTRM-- 95
Query: 132 HGVPGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSNAKTW 191
G I+DC ++ EL G A Q + +SNA+TW
Sbjct: 96 ---KGLKKREVEAIKDCVEEMNDTVDRLTKSVQELK---LCGSAKDQDQFAYHMSNAQTW 149
Query: 192 LSAAMTNEANCADALSSTGAAVSPAARELIAGVVM-AKQYTSIALSFVN 239
SAA+T+E C+D S G + + + +M TS ALS +N
Sbjct: 150 TSAALTDENTCSDGFS--GRVMDGRIKNSVRARIMNVGHETSNALSLIN 196
>AT3G47670.1 | chr3:17575019-17575849 REVERSE LENGTH=277
Length = 276
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 76 LRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADVNAASLKNLTAR--AKEL---- 129
L++ C+ T Y TC F + + L + + +N S+ L+ R AKE+
Sbjct: 113 LKSLCSVTRYPETC----------FNSLSSSLNESDSKLNPESILELSLRVAAKEISNLS 162
Query: 130 VAHGVPGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWAVSNAK 189
++ + P AA + DC ++ E+ R G V + K
Sbjct: 163 ISFRSINDMPEDAA-VGDCVKLYTDALSQLNDSITEIERKKKKG--GNNWLTEEVVGDVK 219
Query: 190 TWLSAAMTNEANCADALSSTGAAVSPAARELIAGVVMAKQYTSIALSFVNTI 241
TW+SAAMT+ C+D + G V E+ + MA Q SI+L+ V+ +
Sbjct: 220 TWISAAMTDGETCSDGIEEMGTIV---GNEIKKKMEMANQMMSISLAIVSQM 268
>AT3G47380.1 | chr3:17457795-17458403 FORWARD LENGTH=203
Length = 202
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 75 FLRASCASTLYRLTCYDALIPSGCAFQTSTVKLARAAADV---NAASLKNLTARAKELVA 131
F++ASC +T Y C ++L + QTS +LA A +V A S K R +
Sbjct: 38 FIQASCKATTYPTVCVNSLTGYANSIQTSPRRLAETALNVTVTQAQSTKVFVWRLGRFTS 97
Query: 132 HGVPGEAPAIAAEIRDCXXXXXXXXGHAKETAAELARLDAMGDAAKGSQARWA-VSNAKT 190
+ I A ++DC + E+ M +AKG W +SNA+T
Sbjct: 98 L----KKREIQA-VKDCIEEIHDAVDRLTMSIHEVK----MCGSAKGRDQFWFHMSNAQT 148
Query: 191 WLSAAMTNEANCADAL 206
W SAA+TN C+D
Sbjct: 149 WTSAALTNANTCSDGF 164
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.124 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,358,708
Number of extensions: 84045
Number of successful extensions: 292
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 286
Number of HSP's successfully gapped: 16
Length of query: 244
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 148
Effective length of database: 8,474,633
Effective search space: 1254245684
Effective search space used: 1254245684
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)