Os10g0185100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0185100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.57 | 0.324 | 13.1 | -1.89 | 0.991 | 0.411 | -0.000598 | -2.11 | -0.168 | 21.4 | 20 | 6033 | -- | -- |
| 50.45 | 0.331 | 13 | -1.32 | 0.997 | 0.541 | -0.0339 | -- | -0.00383 | 21.3 | 13.03 | 5937 | -- | -- |
| 47.56 | 0.321 | 13.1 | -1.91 | 0.991 | 0.408 | -- | -2.18 | -0.173 | 21.4 | 20.26 | 6021 | -- | -- |
| 50.44 | 0.331 | 13 | -1.32 | 0.993 | 0.532 | -- | -- | -0.00314 | 21.3 | 13.2 | 5939 | -- | -- |
| 103.64 | 0.474 | 13.1 | -1.85 | -- | 0.339 | -- | -2.06 | -0.225 | -- | 18.22 | 19508 | -- | -- |
| 55.45 | 0.349 | 13 | -1.06 | 0.995 | -- | 0.033 | -- | 0.119 | 21.4 | -- | -- | -- | -- |
| 55.46 | 0.349 | 13 | -1.06 | 0.995 | -- | -- | -- | 0.119 | 21.4 | -- | -- | -- | -- |
| 89.56 | 0.441 | 13 | -1.36 | -- | 1.23 | -- | -- | -0.0723 | -- | 10.62 | 736 | -- | -- |
| 68.69 | 0.386 | 12.9 | -- | 1 | -0.598 | -- | -- | 0.453 | 21.4 | 19.9 | 47520 | -- | -- |
| 113.33 | 0.497 | 13 | -1.05 | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
| 84.89 | 0.431 | 13 | -- | 0.994 | -- | -- | -- | 0.237 | 21.3 | -- | -- | -- | -- |
| 127.67 | 0.526 | 12.9 | -- | -- | -0.574 | -- | -- | 0.436 | -- | 19.21 | 47520 | -- | -- |
| 142.48 | 0.557 | 13 | -- | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 3 | 41.28 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 19 | 42.50 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 41 | 43.47 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 47 | 43.67 | temperature | 20.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 60 | 44.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 90 | 44.64 | temperature | 25.0 | 270 | < th | dose independent | sin | 6 | NA |
| 96 | 44.73 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 108 | 44.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 160 | 45.40 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 172 | 45.52 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 173 | 45.53 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 174 | 45.53 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 195 | 45.70 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 216 | 45.80 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 239 | 45.84 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 243 | 45.85 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 244 | 45.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 282 | 45.95 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 292 | 45.98 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 306 | 46.02 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 325 | 46.05 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 13 | 12 |
| 331 | 46.06 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 332 | 46.06 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 14 | 10 |
| 337 | 46.07 | temperature | 25.0 | 270 | > th | dose independent | sin | 5 | NA |
| 380 | 46.11 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 392 | 46.13 | temperature | 15.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 423 | 46.18 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 436 | 46.19 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 437 | 46.20 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 470 | 46.23 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 492 | 46.25 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 527 | 46.29 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 541 | 46.31 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 542 | 46.31 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 545 | 46.31 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 559 | 46.32 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 561 | 46.32 | temperature | 15.0 | 43200 | < th | dose dependent | no | NA | NA |
| 562 | 46.32 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 569 | 46.32 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 574 | 46.32 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 581 | 46.32 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 586 | 46.33 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 611 | 46.34 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 672 | 46.36 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 712 | 46.38 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 714 | 46.38 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 728 | 46.39 | temperature | 15.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 755 | 46.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 763 | 46.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 787 | 46.41 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 796 | 46.41 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 818 | 46.42 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 841 | 46.43 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 858 | 46.43 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 869 | 46.44 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 912 | 46.46 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 15 | 14 |
| 914 | 46.46 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 915 | 46.46 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 17 |
| 920 | 46.46 | temperature | 15.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 940 | 46.47 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 942 | 46.47 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 12 | 2 |