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Os10g0169800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
49.66 | 0.331 | 9.28 | -0.584 | 0.729 | -1.25 | 0.234 | 0.543 | 0.242 | 2.35 | 23.64 | 1515 | -- | -- |
49.86 | 0.329 | 9.27 | -0.509 | 0.729 | -1.37 | 0.231 | -- | 0.268 | 2.35 | 23.2 | 1514 | -- | -- |
49.84 | 0.329 | 9.28 | -0.581 | 0.733 | -1.28 | -- | 0.479 | 0.247 | 2.43 | 23.46 | 1527 | -- | -- |
50.03 | 0.329 | 9.27 | -0.515 | 0.736 | -1.37 | -- | -- | 0.266 | 2.44 | 23.2 | 1543 | -- | -- |
75.53 | 0.405 | 9.29 | -0.586 | -- | -1.33 | -- | 0.484 | 0.192 | -- | 26.7 | 1093 | -- | -- |
70.53 | 0.394 | 9.22 | -0.117 | 0.751 | -- | 0.201 | -- | 0.498 | 2.42 | -- | -- | -- | -- |
70.67 | 0.394 | 9.22 | -0.123 | 0.753 | -- | -- | -- | 0.497 | 2.5 | -- | -- | -- | -- |
75.8 | 0.405 | 9.28 | -0.494 | -- | -1.35 | -- | -- | 0.21 | -- | 26.3 | 1083 | -- | -- |
55.83 | 0.348 | 9.25 | -- | 0.722 | -1.06 | -- | -- | 0.356 | 2.45 | 23.47 | 1497 | -- | -- |
103.98 | 0.476 | 9.21 | -0.0907 | -- | -- | -- | -- | 0.516 | -- | -- | -- | -- | -- |
71.06 | 0.394 | 9.21 | -- | 0.75 | -- | -- | -- | 0.51 | 2.5 | -- | -- | -- | -- |
81.4 | 0.42 | 9.26 | -- | -- | -1.13 | -- | -- | 0.308 | -- | 26.3 | 1065 | -- | -- |
104.2 | 0.476 | 9.21 | -- | -- | -- | -- | -- | 0.526 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
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1 | 48.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 3 |
2 | 48.42 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 3 |
17 | 48.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
96 | 48.92 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
455 | 50.02 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
456 | 50.02 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
483 | 50.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
531 | 50.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
539 | 50.30 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
548 | 50.34 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
554 | 50.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
555 | 50.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 13 |
611 | 50.48 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
632 | 50.54 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
675 | 50.63 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
692 | 50.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 19 |
729 | 50.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
738 | 50.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 18 |
758 | 50.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |
760 | 50.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 18 |
775 | 50.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 20 |