Os10g0168900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0168900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.6 | 0.445 | 5.9 | -2.79 | 0.648 | -0.817 | 0.4 | -2.64 | 2.53 | 23.9 | 1011 | 9798 | -- | -- |
| 114.3 | 0.498 | 5.97 | -3.68 | 0.668 | -0.694 | 0.476 | -- | 2.38 | 23.4 | 1011 | 11201 | -- | -- |
| 89.86 | 0.442 | 5.89 | -2.89 | 0.647 | -0.919 | -- | -2.73 | 2.52 | 23.9 | 1012 | 9244 | -- | -- |
| 114.08 | 0.497 | 6 | -3.7 | 0.666 | -0.701 | -- | -- | 2.32 | 23.9 | 1011 | 11141 | -- | -- |
| 116.09 | 0.502 | 5.88 | -2.85 | -- | -0.925 | -- | -2.79 | 2.53 | -- | 1012 | 9309 | -- | -- |
| 135.27 | 0.545 | 5.96 | -3.35 | 0.677 | -- | 0.443 | -- | 2.53 | 0.0584 | -- | -- | -- | -- |
| 136.11 | 0.546 | 5.96 | -3.37 | 0.676 | -- | -- | -- | 2.53 | 0.0184 | -- | -- | -- | -- |
| 142.2 | 0.555 | 5.99 | -3.69 | -- | -0.711 | -- | -- | 2.32 | -- | 1011 | 11141 | -- | -- |
| 433.42 | 0.97 | 5.89 | -- | 0.666 | 0.509 | -- | -- | 2.9 | 23.5 | 1008 | 1054 | -- | -- |
| 164.87 | 0.6 | 5.94 | -3.35 | -- | -- | -- | -- | 2.54 | -- | -- | -- | -- | -- |
| 435.6 | 0.976 | 5.87 | -- | 0.634 | -- | -- | -- | 2.9 | 23.7 | -- | -- | -- | -- |
| 459.42 | 0.998 | 5.87 | -- | -- | 0.305 | -- | -- | 2.85 | -- | 1005 | 1523 | -- | -- |
| 460.87 | 1 | 5.86 | -- | -- | -- | -- | -- | 2.91 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 2 | 88.82 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 4 |
| 3 | 88.98 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 5 | 89.59 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 6 | 89.63 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 10 | 89.91 | wind | 1.0 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 12 | 90.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 13 | 90.14 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 14 | 90.15 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 17 | 90.48 | wind | 1.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 22 | 91.01 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 23 | 91.02 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 28 | 91.18 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 30 | 91.20 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 31 | 91.22 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 36 | 91.27 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 40 | 91.32 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 51 | 91.43 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 52 | 91.43 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 62 | 91.45 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 68 | 91.46 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 81 | 91.52 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 86 | 91.56 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 100 | 91.64 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 103 | 91.66 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 112 | 91.73 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 114 | 91.75 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 120 | 91.79 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 126 | 91.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 129 | 91.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 134 | 91.84 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 138 | 91.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 139 | 91.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 141 | 91.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 145 | 91.86 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 148 | 91.87 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 152 | 91.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 178 | 91.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 244 | 92.02 | humidity | 50.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 248 | 92.05 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 258 | 92.09 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 276 | 92.15 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 386 | 92.41 | humidity | 50.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 515 | 92.68 | atmosphere | 1010.0 | 14400 | > th | dose dependent | no | NA | NA |
| 529 | 92.71 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 536 | 92.72 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 537 | 92.72 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 589 | 92.81 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 603 | 92.83 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 676 | 92.91 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 708 | 92.95 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 727 | 92.98 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 829 | 93.16 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |