Os10g0159300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0159300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 406.02 | 0.947 | 8.57 | -1.79 | 0.723 | -2.16 | 0.628 | 0.649 | -1.47 | 18.3 | 28.81 | 5701 | -- | -- |
| 406.7 | 0.939 | 8.55 | -1.71 | 0.742 | -2.21 | 0.539 | -- | -1.48 | 18.1 | 28.18 | 7008 | -- | -- |
| 406.84 | 0.939 | 8.57 | -1.77 | 0.731 | -2.18 | -- | 0.554 | -1.46 | 18.1 | 28.3 | 5630 | -- | -- |
| 405 | 0.937 | 8.58 | -1.88 | 0.724 | -2.24 | -- | -- | -1.58 | 18 | 30.9 | 10077 | -- | -- |
| 430.2 | 0.966 | 8.55 | -1.73 | -- | -2.09 | -- | 0.631 | -1.43 | -- | 28.79 | 4996 | -- | -- |
| 484.16 | 1.03 | 8.43 | -0.552 | 0.679 | -- | 0.798 | -- | -0.896 | 18.7 | -- | -- | -- | -- |
| 485.64 | 1.03 | 8.43 | -0.563 | 0.685 | -- | -- | -- | -0.893 | 18.4 | -- | -- | -- | -- |
| 430.42 | 0.966 | 8.57 | -1.8 | -- | -2.23 | -- | -- | -1.58 | -- | 39.93 | 9286 | -- | -- |
| 454.29 | 0.993 | 8.46 | -- | 0.606 | -1.41 | -- | -- | -1.04 | 18 | 39.7 | 1944 | -- | -- |
| 510.03 | 1.06 | 8.41 | -0.581 | -- | -- | -- | -- | -0.907 | -- | -- | -- | -- | -- |
| 494 | 1.04 | 8.41 | -- | 0.693 | -- | -- | -- | -0.83 | 18.4 | -- | -- | -- | -- |
| 473.12 | 1.01 | 8.45 | -- | -- | -1.5 | -- | -- | -1.07 | -- | 55.77 | 1966 | -- | -- |
| 518.92 | 1.06 | 8.4 | -- | -- | -- | -- | -- | -0.843 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 401.56 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 2 | 402.27 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 6 | 402.78 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 9 | 404.27 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 19 | 404.32 | temperature | 25 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 22 | 404.49 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 24 | 404.53 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 29 | 404.81 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 34 | 405.04 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 12 |
| 40 | 405.59 | temperature | 15 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 44 | 405.82 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 45 | 405.84 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 53 | 405.98 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 54 | 405.99 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 62 | 406.07 | temperature | 30 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 85 | 406.24 | temperature | 30 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 99 | 406.28 | temperature | 15 | 14400 | > th | dose dependent | sin | 14 | NA |
| 210 | 406.50 | temperature | 30 | 14400 | < th | dose dependent | sin | 14 | NA |
| 396 | 406.74 | temperature | 25 | 4320 | < th | dose dependent | rect. | 4 | 11 |
| 469 | 406.82 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 548 | 406.88 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 571 | 406.90 | temperature | 15 | 14400 | > th | dose dependent | no | NA | NA |
| 584 | 406.90 | temperature | 15 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 595 | 406.91 | temperature | 15 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 661 | 406.96 | temperature | 30 | 14400 | < th | dose dependent | no | NA | NA |
| 701 | 406.98 | temperature | 30 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 748 | 407.01 | temperature | 30 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 757 | 407.02 | temperature | 30 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 758 | 407.03 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 825 | 407.07 | temperature | 30 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 841 | 407.09 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 843 | 407.09 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 11 |