Os10g0158700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0158700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.44 | 0.444 | 9.58 | -0.281 | 1.18 | -0.132 | 0.691 | 2.66 | -0.0501 | 4.88 | 20.6 | 3147 | -- | -- |
| 94.8 | 0.453 | 9.7 | -0.505 | 1.18 | -0.801 | 0.241 | -- | -0.157 | 4.99 | 15.75 | 23042 | -- | -- |
| 90.42 | 0.443 | 9.6 | -0.315 | 1.19 | -0.191 | -- | 2.53 | -0.0701 | 4.79 | 20.4 | 2934 | -- | -- |
| 95.09 | 0.454 | 9.68 | -0.509 | 1.17 | -0.865 | -- | -- | -0.15 | 4.77 | 15.71 | 21776 | -- | -- |
| 164.07 | 0.597 | 9.58 | -0.139 | -- | 0.0144 | -- | 3.01 | -0.0121 | -- | 21.33 | 4244 | -- | -- |
| 106.34 | 0.483 | 9.72 | -1.09 | 1.16 | -- | 0.755 | -- | -0.318 | 4.91 | -- | -- | -- | -- |
| 107.74 | 0.486 | 9.72 | -1.1 | 1.17 | -- | -- | -- | -0.322 | 4.8 | -- | -- | -- | -- |
| 167.53 | 0.603 | 9.68 | -0.408 | -- | -0.912 | -- | -- | -0.121 | -- | 15.2 | 21909 | -- | -- |
| 98.37 | 0.462 | 9.66 | -- | 1.17 | -1.13 | -- | -- | -0.0447 | 4.78 | 13.48 | 47520 | -- | -- |
| 179.92 | 0.627 | 9.73 | -1.05 | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
| 139.4 | 0.552 | 9.7 | -- | 1.15 | -- | -- | -- | -0.2 | 4.83 | -- | -- | -- | -- |
| 170.55 | 0.608 | 9.67 | -- | -- | -1.11 | -- | -- | -0.0252 | -- | 12.93 | 47520 | -- | -- |
| 209.13 | 0.675 | 9.71 | -- | -- | -- | -- | -- | -0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.85 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 85.91 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 4 | 87.15 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 5 | 87.26 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 6 | 87.42 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 22 | 87.48 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 23 | 87.59 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 24 | 87.61 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 26 | 87.65 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 20 | 5 |
| 27 | 87.66 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 30 | 87.70 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 33 | 87.72 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 35 | 87.78 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 60 | 87.99 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 19 |
| 63 | 88.06 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 80 | 88.10 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 82 | 88.12 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 11 | 19 |
| 86 | 88.16 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 87 | 88.17 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 20 |
| 95 | 88.24 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 103 | 88.33 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 116 | 88.45 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 117 | 88.45 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 125 | 88.48 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 153 | 88.61 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 158 | 88.63 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 161 | 88.65 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 164 | 88.67 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 168 | 88.72 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 171 | 88.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 178 | 88.77 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 180 | 88.77 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 182 | 88.79 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 185 | 88.80 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 198 | 88.86 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 200 | 88.86 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 206 | 88.91 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 215 | 88.96 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 225 | 89.04 | wind | 5.0 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 233 | 89.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 239 | 89.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 240 | 89.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 264 | 89.20 | wind | 5.0 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 269 | 89.21 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 271 | 89.22 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 286 | 89.29 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 312 | 89.45 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 357 | 89.62 | atmosphere | 995.0 | 43200 | < th | dose dependent | no | NA | NA |
| 358 | 89.62 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 21 |
| 366 | 89.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 385 | 89.68 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 396 | 89.70 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 409 | 89.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 418 | 89.79 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 422 | 89.79 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 426 | 89.80 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 436 | 89.85 | radiation | 10.0 | 1440 | < th | dose independent | sin | 18 | NA |
| 446 | 89.87 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 448 | 89.88 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 458 | 89.90 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 473 | 89.94 | temperature | 20.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 483 | 89.98 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 4 |
| 489 | 90.00 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 499 | 90.03 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 526 | 90.12 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 530 | 90.13 | temperature | 20.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 547 | 90.17 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 575 | 90.22 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 611 | 90.26 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 625 | 90.29 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 22 | 10 |
| 646 | 90.33 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 684 | 90.42 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 691 | 90.43 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 701 | 90.45 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 753 | 90.56 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 777 | 90.61 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 789 | 90.63 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 848 | 90.70 | temperature | 20.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 897 | 90.78 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 919 | 90.84 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 17 |
| 930 | 90.85 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 932 | 90.85 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 972 | 90.89 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 982 | 90.90 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 13 |