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Os10g0134500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.89 (0.0301) R2 : 0.592
β1 : 1.67 (0.11) R2dD : 0.214 R2D : 0.0208
β2 : 1.06 (0.0786) R2dC : 0.165 R2C : 0.0939
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.14 (0.0643) R2dN8 : 0.38 R2N8 : 0.208
σ : 0.566
deviance : 146.15
__
_____
C
peak time of C : 6.27
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
123.86 0.523 7.09 -0.063 1.06 1.22 -0.0411 -6.35 0.778 6.62 26.24 1268 -- --
130.84 0.533 6.94 1.39 1.03 0.666 -0.393 -- 0.9 5.99 24.88 10480 -- --
123.76 0.518 7.09 -0.0843 1.07 1.27 -- -6.67 0.784 6.65 26.46 1244 -- --
130.25 0.532 6.93 1.38 1.04 0.615 -- -- 0.946 6.32 24.9 10504 -- --
181.84 0.628 7.09 0.129 -- 1.19 -- -5.46 0.837 -- 26.05 1287 -- --
146.1 0.567 6.9 1.67 1.06 -- -0.146 -- 1.14 6.24 -- -- -- --
146.15 0.566 6.89 1.67 1.06 -- -- -- 1.14 6.27 -- -- -- --
187.39 0.638 6.97 1.44 -- 0.64 -- -- 0.923 -- 25.64 8534 -- --
132.12 0.535 7.04 -- 1.06 1.49 -- -- 0.504 6.39 12.27 47520 -- --
204.8 0.669 6.91 1.7 -- -- -- -- 1.17 -- -- -- -- --
219.85 0.694 6.94 -- 1.09 -- -- -- 0.957 6.19 -- -- -- --
190.06 0.642 7.06 -- -- 1.52 -- -- 0.515 -- 12.5 47520 -- --
281.11 0.783 6.96 -- -- -- -- -- 0.978 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 116.95 wind 5.0 270 < th dose independent rect. 1 6
2 117.13 wind 7.0 270 < th dose dependent rect. 1 6
6 118.01 wind 5.0 270 < th dose independent rect. 2 4
7 118.11 wind 7.0 270 < th dose dependent rect. 2 4
18 119.72 precipitation 0.1 270 < th dose independent rect. 1 6
19 119.72 precipitation 0.1 270 < th dose dependent rect. 1 6
29 120.41 radiation 10.0 270 < th dose independent rect. 1 6
32 120.54 radiation 40.0 270 < th dose dependent rect. 1 6
39 120.65 atmosphere 1010.0 270 < th dose independent rect. 1 6
41 120.67 precipitation 0.1 270 < th dose independent rect. 2 4
42 120.67 precipitation 0.1 270 < th dose dependent rect. 2 4
43 120.68 temperature 10.0 270 > th dose independent rect. 1 6
45 120.68 temperature 30.0 270 < th dose independent rect. 1 6
46 120.68 humidity 50.0 270 > th dose independent rect. 1 6
48 120.68 atmosphere 995.0 270 > th dose independent rect. 1 6
50 120.68 radiation 40.0 270 < th dose independent rect. 1 6
51 120.68 temperature 10.0 270 > th dose independent rect. 7 18
57 120.79 wind 5.0 270 < th dose independent rect. 3 2
64 121.05 precipitation 0.1 270 < th dose independent rect. 7 18
65 121.05 precipitation 0.1 270 < th dose dependent rect. 7 18
68 121.09 wind 9.0 270 < th dose independent rect. 7 18
74 121.32 humidity 50.0 270 > th dose dependent rect. 1 6
82 121.71 temperature 10.0 270 > th dose independent rect. 2 4
84 121.71 temperature 30.0 270 < th dose independent rect. 2 4
85 121.71 humidity 50.0 270 > th dose independent rect. 2 4
88 121.71 atmosphere 995.0 270 > th dose independent rect. 2 4
89 121.71 atmosphere 1015.0 270 < th dose independent rect. 2 4
90 121.71 radiation 20.0 270 < th dose independent rect. 2 4
93 121.71 temperature 10.0 270 > th dose independent rect. 6 20
95 121.74 radiation 1.0 270 > th dose independent rect. 6 8
105 121.91 precipitation 0.1 270 < th dose independent rect. 14 16
106 121.91 radiation 40.0 270 < th dose dependent rect. 2 4
107 121.91 precipitation 0.1 270 < th dose dependent rect. 14 16
114 122.07 precipitation 0.1 270 < th dose independent rect. 6 20
115 122.07 precipitation 0.1 270 < th dose dependent rect. 6 20
117 122.12 atmosphere 995.0 270 > th dose independent rect. 14 16
120 122.15 wind 9.0 270 < th dose independent rect. 14 16
134 122.18 atmosphere 1015.0 270 < th dose independent rect. 7 18
137 122.23 humidity 50.0 270 > th dose dependent rect. 2 4
142 122.33 temperature 15.0 270 > th dose independent rect. 14 16
143 122.34 wind 9.0 270 < th dose independent rect. 6 8
144 122.35 humidity 50.0 270 > th dose independent rect. 7 18
155 122.56 precipitation 0.1 270 < th dose independent rect. 6 8
157 122.56 precipitation 0.1 270 < th dose dependent rect. 6 8
159 122.58 precipitation 0.1 270 < th dose independent rect. 3 2
161 122.58 precipitation 0.1 270 < th dose dependent rect. 3 2
164 122.60 wind 7.0 10 < th dose dependent rect. 4 4
168 122.62 temperature 10.0 270 > th dose independent rect. 6 8
169 122.62 atmosphere 995.0 270 > th dose independent rect. 6 8
170 122.62 atmosphere 1015.0 270 < th dose independent rect. 6 8
172 122.62 wind 9.0 270 < th dose independent rect. 6 20
184 122.64 radiation 40.0 270 < th dose independent rect. 13 17
193 122.75 humidity 50.0 270 > th dose independent rect. 6 20
196 122.77 radiation 1.0 270 < th dose dependent rect. 17 9
198 122.81 atmosphere 995.0 270 > th dose independent rect. 2 16
199 122.81 precipitation 0.1 270 < th dose independent rect. 2 16
201 122.81 precipitation 0.1 270 < th dose dependent rect. 2 16
202 122.82 radiation 1.0 30 < th dose dependent sin 12 NA
205 122.88 humidity 50.0 10 > th dose dependent rect. 18 10
220 122.98 radiation 1.0 270 < th dose independent rect. 17 9
223 123.01 temperature 10.0 270 > th dose dependent rect. 2 4
227 123.05 radiation 1.0 30 < th dose independent sin 12 NA
228 123.06 temperature 10.0 270 > th dose dependent rect. 1 6
231 123.08 humidity 50.0 270 > th dose independent rect. 6 8
261 123.38 wind 5.0 10 < th dose independent rect. 4 4
285 123.49 temperature 10.0 270 > th dose independent rect. 18 8
286 123.49 humidity 50.0 270 > th dose independent rect. 18 8
287 123.49 radiation 20.0 270 < th dose independent rect. 18 8
290 123.49 temperature 10.0 270 > th dose independent rect. 2 16
291 123.49 atmosphere 1015.0 270 < th dose independent rect. 2 16
314 123.60 wind 9.0 270 < th dose independent rect. 18 8
317 123.61 humidity 50.0 90 > th dose dependent rect. 18 9
318 123.63 radiation 10.0 270 < th dose dependent rect. 1 12
331 123.73 wind 1.0 270 > th dose independent rect. 7 18
338 123.77 wind 9.0 270 < th dose independent rect. 2 16
343 123.79 humidity 50.0 270 > th dose dependent rect. 18 7
346 123.83 radiation 1.0 270 < th dose independent rect. 3 2
355 123.85 atmosphere 995.0 270 > th dose independent rect. 18 8
356 123.85 radiation 10.0 270 < th dose dependent rect. 3 2
365 123.88 temperature 10.0 270 > th dose independent rect. 3 2
368 123.88 humidity 50.0 270 > th dose independent rect. 3 2
371 123.88 atmosphere 995.0 270 > th dose independent rect. 3 2
372 123.88 atmosphere 1010.0 270 < th dose independent rect. 3 2
377 123.88 temperature 10.0 270 > th dose independent rect. 5 22
379 123.93 humidity 50.0 270 > th dose dependent rect. 3 2
399 124.06 atmosphere 995.0 270 > th dose independent rect. 7 18
403 124.07 radiation 30.0 1440 < th dose dependent rect. 18 10
429 124.21 temperature 30.0 270 < th dose independent rect. 18 8
435 124.21 humidity 60.0 90 > th dose dependent rect. 21 6
446 124.27 radiation 1.0 10 > th dose independent rect. 8 9
458 124.35 precipitation 0.1 270 < th dose independent rect. 18 8
460 124.35 precipitation 0.1 270 < th dose dependent rect. 18 8
467 124.40 radiation 1.0 30 > th dose independent rect. 17 14
482 124.50 humidity 60.0 10 > th dose dependent rect. 21 7
520 124.63 atmosphere 995.0 270 > th dose dependent rect. 2 4
525 124.65 radiation 40.0 1440 < th dose independent rect. 19 14
540 124.72 radiation 40.0 1440 < th dose independent rect. 22 11
545 124.73 precipitation 0.1 270 < th dose independent rect. 5 22
549 124.73 wind 9.0 10 < th dose dependent rect. 16 16
550 124.73 precipitation 0.1 270 < th dose dependent rect. 5 22
580 124.85 precipitation 0.1 10 < th dose independent rect. 4 4
582 124.85 precipitation 0.1 10 < th dose dependent rect. 4 4
627 124.96 wind 1.0 270 > th dose independent rect. 6 8
691 125.09 radiation 40.0 4320 < th dose independent rect. 8 1
704 125.14 temperature 10.0 10 > th dose independent rect. 4 4
706 125.14 temperature 30.0 10 < th dose independent rect. 4 4
707 125.14 humidity 50.0 10 > th dose independent rect. 4 4
709 125.14 atmosphere 995.0 10 > th dose independent rect. 4 4
710 125.14 atmosphere 1015.0 10 < th dose independent rect. 4 4
713 125.14 temperature 10.0 10 > th dose independent rect. 8 20
714 125.15 radiation 40.0 1440 > th dose independent rect. 8 1
733 125.16 radiation 40.0 10 < th dose independent rect. 4 4
736 125.16 wind 1.0 270 > th dose independent rect. 6 20
739 125.17 atmosphere 995.0 270 > th dose independent rect. 6 20
747 125.20 radiation 40.0 270 < th dose independent rect. 11 20
765 125.26 radiation 40.0 270 < th dose dependent rect. 14 16
779 125.27 radiation 1.0 270 < th dose independent rect. 2 13
864 125.47 radiation 1.0 14400 < th dose dependent rect. 19 10
902 125.54 radiation 40.0 1440 < th dose dependent rect. 23 7
908 125.57 wind 9.0 10 < th dose independent rect. 8 20
909 125.57 temperature 10.0 90 > th dose dependent rect. 16 15
932 125.60 radiation 10.0 10 < th dose independent rect. 4 18
938 125.61 temperature 25.0 720 > th dose dependent rect. 19 2
953 125.64 atmosphere 1015.0 10 < th dose independent rect. 8 20
959 125.66 precipitation 0.1 10 < th dose independent rect. 4 17
961 125.66 precipitation 0.1 10 < th dose dependent rect. 4 17
983 125.74 humidity 50.0 4320 > th dose independent rect. 17 12
986 125.74 wind 9.0 270 < th dose independent rect. 5 22
996 125.76 radiation 1.0 14400 < th dose dependent rect. 23 6