Os10g0132300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Jasmonate-induced protein.
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Os10g0132300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Jasmonate-induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 224.01 | 0.703 | 10.2 | -0.402 | 2.2 | -1.49 | -0.208 | 0.953 | 0.0383 | 9.73 | 1009 | 4692 | -- | -- |
| 226.03 | 0.7 | 10.1 | -0.209 | 2.2 | -1.54 | -0.255 | -- | 0.0797 | 9.74 | 1009 | 4937 | -- | -- |
| 224.17 | 0.697 | 10.2 | -0.413 | 2.2 | -1.48 | -- | 0.966 | 0.0365 | 9.72 | 1010 | 4670 | -- | -- |
| 226.23 | 0.701 | 10.1 | -0.209 | 2.2 | -1.54 | -- | -- | 0.0789 | 9.72 | 1010 | 4877 | -- | -- |
| 511.31 | 1.05 | 10.2 | -0.45 | -- | -1.48 | -- | 1.07 | 0.0288 | -- | 1010 | 4434 | -- | -- |
| 286.01 | 0.793 | 10.1 | 0.236 | 2.22 | -- | -0.273 | -- | 0.365 | 9.64 | -- | -- | -- | -- |
| 286.29 | 0.792 | 10.1 | 0.226 | 2.22 | -- | -- | -- | 0.364 | 9.64 | -- | -- | -- | -- |
| 514.17 | 1.06 | 10.2 | -0.209 | -- | -1.55 | -- | -- | 0.0745 | -- | 1010 | 4578 | -- | -- |
| 227.24 | 0.702 | 10.1 | -- | 2.2 | -1.49 | -- | -- | 0.105 | 9.72 | 1010 | 4804 | -- | -- |
| 577.48 | 1.12 | 10.1 | 0.207 | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
| 287.63 | 0.793 | 10.1 | -- | 2.22 | -- | -- | -- | 0.339 | 9.63 | -- | -- | -- | -- |
| 515.24 | 1.06 | 10.2 | -- | -- | -1.49 | -- | -- | 0.102 | -- | 1010 | 4549 | -- | -- |
| 578.61 | 1.12 | 10.1 | -- | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.08 | humidity | 70 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 10 | 215.48 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 15 | 215.70 | humidity | 90 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 23 | 215.85 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 27 | 215.88 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 38 | 216.11 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 42 | 216.15 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 52 | 216.26 | humidity | 70 | 43200 | > th | dose independent | sin | 3 | NA |
| 60 | 216.34 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 62 | 216.37 | humidity | 70 | 43200 | < th | dose independent | sin | 4 | NA |
| 88 | 216.55 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 22 |
| 105 | 216.68 | humidity | 50 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 108 | 216.68 | humidity | 50 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 112 | 216.69 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 154 | 216.76 | humidity | 50 | 43200 | < th | dose dependent | rect. | 17 | 22 |
| 160 | 216.78 | humidity | 50 | 43200 | < th | dose dependent | sin | 1 | NA |
| 232 | 216.93 | humidity | 50 | 43200 | < th | dose dependent | rect. | 5 | 17 |
| 247 | 216.94 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 388 | 217.14 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 423 | 217.27 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 475 | 217.50 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 491 | 217.59 | humidity | 70 | 43200 | < th | dose independent | rect. | 4 | 21 |
| 493 | 217.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 18 |
| 506 | 217.63 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 18 |
| 518 | 217.66 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 519 | 217.66 | humidity | 70 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 544 | 217.70 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 545 | 217.70 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 556 | 217.71 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 584 | 217.75 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 595 | 217.77 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 616 | 217.79 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 627 | 217.81 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 672 | 217.86 | humidity | 90 | 43200 | < th | dose dependent | sin | 23 | NA |
| 719 | 217.94 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 766 | 218.05 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 782 | 218.10 | humidity | 70 | 43200 | > th | dose independent | no | NA | NA |
| 809 | 218.16 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 812 | 218.17 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 847 | 218.26 | humidity | 50 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 915 | 218.44 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 949 | 218.52 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 954 | 218.53 | humidity | 50 | 43200 | < th | dose independent | sin | 6 | NA |
| 962 | 218.55 | humidity | 60 | 43200 | > th | dose dependent | rect. | 20 | 1 |