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Os10g0130500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0293) R2 : 0.737
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.38 (0.125) R2dC : 1.22 R2C : -1.26
β3 : 3.87 (0.11) R2dE : 1.99 R2E : -0.48
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.172 (0.0617) R2dN8 : 0.00615 R2N8 : 0.00191
σ : 0.551
deviance : 138.2
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C
peak time of C : 15.7
E
wheather : radiation
threshold : 20.41
memory length : 6
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 4.05
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
132.25 0.54 10.2 -0.0251 3.66 4.03 -2.31 -2.04 0.215 15.8 22.03 14 3.92 --
138.05 0.551 10.2 -0.0261 3.32 3.8 -0.222 -- 0.169 15.8 20.41 6 4.05 --
137.52 0.546 10.2 -0.0307 3.56 4.02 -- -0.699 0.205 15.7 21.44 13 4.07 --
138.18 0.551 10.2 -0.0293 3.38 3.87 -- -- 0.168 15.7 20.41 6 4.05 --
180.79 0.63 10.2 -0.0235 -- 2.35 -- -1.13 0.163 -- 89.99 2 8.7 --
177.19 0.624 10.3 -0.0651 2.43 -- -1.16 -- 0.14 21.5 -- -- -- --
182.12 0.632 10.3 -0.0231 2.43 -- -- -- 0.141 21.5 -- -- -- --
182.43 0.632 10.2 -0.0222 -- 2.4 -- -- 0.146 -- 328.8 2 8.48 --
138.2 0.551 10.2 -- 3.38 3.87 -- -- 0.172 15.7 20.41 6 4.05 --
530.46 1.08 10.2 -0.00537 -- -- -- -- 0.135 -- -- -- -- --
182.13 0.631 10.3 -- 2.43 -- -- -- 0.143 21.5 -- -- -- --
182.28 0.631 10.2 -- -- 2.4 -- -- 0.147 -- 499.3 2 8.5 --
530.46 1.08 10.2 -- -- -- -- -- 0.135 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 133.18 radiation 20.0 10 < th dose dependent sin 10 NA
27 139.19 radiation 1.0 10 > th dose dependent sin 11 NA
47 143.24 radiation 10.0 90 < th dose dependent rect. 23 15
49 143.49 radiation 1.0 270 > th dose dependent rect. 4 3
66 144.03 humidity 50.0 90 > th dose dependent rect. 9 20
72 145.03 radiation 1.0 90 < th dose independent sin 9 NA
101 145.64 radiation 1.0 90 > th dose independent sin 9 NA
113 146.45 temperature 30.0 270 < th dose dependent rect. 4 5
134 147.07 radiation 1.0 90 < th dose independent rect. 23 18
205 148.39 radiation 1.0 90 > th dose independent rect. 4 5
237 148.95 radiation 10.0 90 < th dose dependent rect. 21 20
243 149.10 radiation 10.0 90 < th dose dependent rect. 21 18
275 149.61 radiation 1.0 90 < th dose independent rect. 23 9
294 149.75 humidity 50.0 270 > th dose dependent rect. 8 8
300 149.88 precipitation 0.1 270 < th dose independent rect. 4 4
301 149.88 precipitation 0.1 270 < th dose dependent rect. 4 4
308 149.97 wind 9.0 270 < th dose dependent rect. 4 4
313 150.13 wind 7.0 270 < th dose independent rect. 4 4
314 150.14 wind 9.0 270 < th dose independent rect. 8 20
325 150.28 temperature 10.0 270 > th dose independent rect. 4 4
327 150.28 temperature 30.0 270 < th dose independent rect. 4 4
328 150.28 humidity 50.0 270 > th dose independent rect. 4 4
330 150.28 atmosphere 995.0 270 > th dose independent rect. 4 4
331 150.28 atmosphere 1015.0 270 < th dose independent rect. 4 4
332 150.28 temperature 10.0 270 > th dose independent rect. 8 20
338 150.39 precipitation 0.1 270 < th dose independent rect. 3 6
339 150.39 precipitation 0.1 270 < th dose dependent rect. 3 6
373 150.76 temperature 15.0 270 > th dose independent rect. 4 17
380 150.90 humidity 60.0 270 > th dose independent rect. 8 20
381 150.90 atmosphere 995.0 270 > th dose independent rect. 8 20
382 150.94 wind 7.0 270 < th dose independent rect. 3 6
383 150.95 temperature 30.0 270 < th dose independent rect. 3 6
386 150.97 precipitation 0.1 90 < th dose independent rect. 5 18
387 150.97 precipitation 0.1 90 < th dose dependent rect. 5 18
391 151.02 wind 9.0 270 < th dose independent rect. 9 18
392 151.06 radiation 1.0 90 < th dose independent rect. 21 22
396 151.15 radiation 40.0 270 < th dose independent rect. 4 4
398 151.15 temperature 10.0 270 > th dose independent rect. 3 6
400 151.15 humidity 50.0 270 > th dose independent rect. 3 6
401 151.15 atmosphere 995.0 270 > th dose independent rect. 3 6
402 151.15 atmosphere 1015.0 270 < th dose independent rect. 3 6
403 151.15 temperature 10.0 270 > th dose independent rect. 9 18
412 151.25 radiation 1.0 90 < th dose dependent rect. 21 22
420 151.37 temperature 15.0 270 > th dose independent rect. 3 20
427 151.44 precipitation 0.1 270 < th dose independent rect. 3 19
430 151.44 precipitation 0.1 270 < th dose dependent rect. 3 19
436 151.54 humidity 70.0 90 > th dose independent rect. 11 18
457 151.79 atmosphere 995.0 270 > th dose independent rect. 9 18
462 151.83 humidity 50.0 10 > th dose independent rect. 10 19
480 152.06 atmosphere 995.0 270 > th dose dependent rect. 4 4
503 152.22 radiation 10.0 90 > th dose independent rect. 6 2
540 152.36 radiation 1.0 90 < th dose independent rect. 21 20
547 152.41 precipitation 0.1 270 < th dose independent rect. 13 10
548 152.41 precipitation 0.1 270 < th dose dependent rect. 13 10
554 152.44 radiation 40.0 90 < th dose dependent rect. 11 18
558 152.46 precipitation 0.1 270 < th dose independent rect. 8 20
561 152.46 precipitation 0.1 270 < th dose dependent rect. 8 20
563 152.48 atmosphere 1015.0 270 < th dose independent rect. 8 20
645 152.76 precipitation 0.1 270 < th dose independent rect. 17 15
647 152.76 precipitation 0.1 270 < th dose dependent rect. 17 15
654 152.83 humidity 50.0 10 > th dose dependent rect. 10 7
661 152.86 precipitation 0.1 270 < th dose independent rect. 9 18
662 152.86 precipitation 0.1 270 < th dose dependent rect. 9 18
665 152.89 radiation 40.0 90 < th dose dependent rect. 9 20
668 152.92 wind 7.0 270 < th dose independent rect. 21 7
669 152.93 temperature 10.0 270 > th dose dependent rect. 23 14
732 153.21 atmosphere 1015.0 90 < th dose independent rect. 23 6
750 153.25 atmosphere 1015.0 270 < th dose independent rect. 9 18
751 153.26 temperature 10.0 270 > th dose independent rect. 21 7
752 153.26 temperature 30.0 270 < th dose independent rect. 21 7
753 153.26 humidity 50.0 270 > th dose independent rect. 21 7
756 153.26 atmosphere 995.0 270 > th dose independent rect. 21 7
757 153.26 radiation 1.0 270 < th dose independent rect. 21 7
763 153.26 radiation 1.0 270 < th dose dependent rect. 21 7
782 153.32 wind 7.0 90 < th dose independent rect. 23 6
802 153.39 temperature 10.0 90 > th dose independent rect. 23 6
803 153.39 temperature 30.0 90 < th dose independent rect. 23 6
804 153.39 humidity 50.0 90 > th dose independent rect. 23 6
807 153.39 atmosphere 995.0 90 > th dose independent rect. 23 6
813 153.42 wind 9.0 270 < th dose dependent rect. 22 5
817 153.44 humidity 50.0 90 > th dose dependent rect. 23 16
829 153.51 radiation 10.0 270 < th dose dependent rect. 9 19
847 153.60 atmosphere 1015.0 270 < th dose independent rect. 23 14
854 153.65 temperature 10.0 270 > th dose independent rect. 13 10
855 153.65 temperature 10.0 270 > th dose independent rect. 23 14
856 153.65 atmosphere 995.0 270 > th dose independent rect. 23 14
863 153.69 humidity 60.0 270 > th dose independent rect. 8 8
875 153.75 humidity 60.0 270 > th dose independent rect. 23 15
888 153.81 wind 9.0 270 < th dose independent rect. 23 14
937 153.92 wind 9.0 90 < th dose independent rect. 5 18
944 153.94 radiation 40.0 90 < th dose independent rect. 10 19
963 153.99 atmosphere 995.0 270 > th dose dependent rect. 5 2
975 154.02 atmosphere 995.0 270 > th dose dependent rect. 23 4
988 154.04 precipitation 0.1 90 < th dose independent rect. 23 6
995 154.04 precipitation 0.1 90 < th dose dependent rect. 23 6