Os10g0124100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0124100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.67 | 0.437 | 11.1 | -1.37 | 1.55 | 1.67 | -0.953 | 0.906 | -0.477 | 11.2 | 17.7 | 12 | -- | -- |
| 87.14 | 0.435 | 11.1 | -1.52 | 1.55 | 1.64 | -0.751 | -- | -0.519 | 11.1 | 18.5 | 12 | -- | -- |
| 89.62 | 0.441 | 11.1 | -1.47 | 1.57 | 1.61 | -- | 0.0648 | -0.501 | 11.3 | 18.2 | 9 | -- | -- |
| 89.5 | 0.441 | 11.1 | -1.55 | 1.56 | 1.63 | -- | -- | -0.515 | 11.2 | 18.1 | 11 | -- | -- |
| 211.94 | 0.682 | 11.2 | -1.89 | -- | 2.84 | -- | -0.484 | -0.731 | -- | 18.2 | 9 | -- | -- |
| 124.14 | 0.522 | 11 | -1.17 | 1.98 | -- | -0.465 | -- | -0.241 | 12 | -- | -- | -- | -- |
| 125.08 | 0.524 | 11.1 | -1.19 | 1.98 | -- | -- | -- | -0.243 | 12 | -- | -- | -- | -- |
| 212.13 | 0.681 | 11.2 | -1.81 | -- | 2.85 | -- | -- | -0.71 | -- | 18 | 8 | -- | -- |
| 146.45 | 0.567 | 11.1 | -- | 1.71 | 1 | -- | -- | -0.257 | 11.6 | 19.55 | 17 | -- | -- |
| 372.8 | 0.902 | 11.1 | -1.25 | -- | -- | -- | -- | -0.271 | -- | -- | -- | -- | -- |
| 162.38 | 0.596 | 11 | -- | 2 | -- | -- | -- | -0.11 | 12 | -- | -- | -- | -- |
| 293.31 | 0.8 | 11.1 | -- | -- | 2.32 | -- | -- | -0.448 | -- | 19.08 | 5 | -- | -- |
| 414.12 | 0.95 | 11.1 | -- | -- | -- | -- | -- | -0.132 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.12 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 6 | 86.17 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 7 | 86.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 9 | 86.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 15 | 87.28 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 23 | 87.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 25 | 87.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 29 | 88.02 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 33 | 88.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 39 | 88.14 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 47 | 88.43 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 50 | 88.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 51 | 88.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 52 | 88.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 53 | 88.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 54 | 88.62 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 56 | 88.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 58 | 88.68 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 64 | 88.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 71 | 89.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 81 | 89.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 101 | 89.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 107 | 89.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 114 | 89.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 118 | 89.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 123 | 90.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 126 | 90.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 139 | 90.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 170 | 90.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 194 | 90.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 215 | 91.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 225 | 91.24 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 238 | 91.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 247 | 91.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 303 | 91.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 333 | 92.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 384 | 92.28 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 13 |
| 405 | 92.39 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 468 | 92.69 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 471 | 92.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 553 | 93.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 584 | 93.14 | temperature | 20 | 90 | > th | dose dependent | rect. | 10 | 23 |
| 672 | 93.49 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 676 | 93.50 | temperature | 20 | 4320 | > th | dose dependent | sin | 12 | NA |
| 753 | 93.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 19 |
| 760 | 93.77 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 763 | 93.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 770 | 93.79 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 863 | 94.03 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 976 | 94.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |