Os10g0116900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0116900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.97 | 0.351 | 8.92 | -0.123 | 0.259 | -0.51 | -0.25 | -1.28 | -0.308 | 19 | 59.59 | 1459 | -- | -- |
| 56.85 | 0.351 | 8.94 | -0.236 | 0.269 | -0.732 | -0.214 | -- | -0.402 | 18.5 | 61 | 2720 | -- | -- |
| 56.1 | 0.349 | 8.92 | -0.125 | 0.266 | -0.499 | -- | -1.24 | -0.305 | 18.5 | 57.8 | 1427 | -- | -- |
| 56.77 | 0.351 | 8.94 | -0.236 | 0.263 | -0.756 | -- | -- | -0.393 | 17.7 | 60.92 | 2692 | -- | -- |
| 57.23 | 0.352 | 8.93 | -0.141 | -- | -0.705 | -- | -0.843 | -0.363 | -- | 64.77 | 2093 | -- | -- |
| 66.39 | 0.382 | 8.92 | -0.258 | 0.247 | -- | -0.289 | -- | -0.296 | 19.2 | -- | -- | -- | -- |
| 66.6 | 0.382 | 8.92 | -0.251 | 0.248 | -- | -- | -- | -0.297 | 19 | -- | -- | -- | -- |
| 58.09 | 0.355 | 8.93 | -0.227 | -- | -0.778 | -- | -- | -0.392 | -- | 65 | 2107 | -- | -- |
| 58.15 | 0.355 | 8.93 | -- | 0.284 | -0.77 | -- | -- | -0.377 | 17.6 | 61.74 | 2700 | -- | -- |
| 69.83 | 0.39 | 8.91 | -0.256 | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
| 68.26 | 0.386 | 8.91 | -- | 0.251 | -- | -- | -- | -0.269 | 18.9 | -- | -- | -- | -- |
| 59.5 | 0.359 | 8.93 | -- | -- | -0.786 | -- | -- | -0.372 | -- | 66.2 | 2111 | -- | -- |
| 71.56 | 0.395 | 8.91 | -- | -- | -- | -- | -- | -0.273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.33 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 2 | 49.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 3 | 49.86 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 4 | 49.91 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 5 | 50.01 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 6 | 50.02 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 10 | 50.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 12 | 50.08 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 32 | 50.15 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 49 | 50.27 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 94 | 50.43 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 128 | 50.65 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 131 | 50.66 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 142 | 50.67 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 396 | 51.52 | wind | 5.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 521 | 51.82 | humidity | 70.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 531 | 51.84 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 562 | 51.95 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 563 | 51.95 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 591 | 52.01 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 706 | 52.29 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 716 | 52.32 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 720 | 52.33 | humidity | 70.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 790 | 52.45 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 802 | 52.47 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 810 | 52.48 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 889 | 52.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 903 | 52.67 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |