Os10g0115600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70) (U1-70K). Splice isoform Short.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0115600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70) (U1-70K). Splice isoform Short.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.37 | 0.287 | 13.2 | -0.4 | 0.4 | 0.365 | 0.872 | -0.306 | 0.34 | 22.5 | 20.41 | 106 | -- | -- |
| 37.77 | 0.286 | 13.2 | -0.342 | 0.404 | 0.384 | 0.981 | -- | 0.344 | 22.7 | 20.5 | 105 | -- | -- |
| 40.01 | 0.295 | 13.2 | -0.469 | 0.403 | 0.344 | -- | -0.528 | 0.331 | 21.9 | 20.5 | 105 | -- | -- |
| 40.88 | 0.298 | 13.2 | -0.433 | 0.387 | 0.495 | -- | -- | 0.352 | 21.9 | 19.31 | 174 | -- | -- |
| 48.83 | 0.325 | 13.2 | -0.508 | -- | 0.33 | -- | -0.462 | 0.314 | -- | 20.5 | 336 | -- | -- |
| 43.8 | 0.31 | 13.2 | -0.24 | 0.346 | -- | 0.955 | -- | 0.424 | 22.2 | -- | -- | -- | -- |
| 46.92 | 0.321 | 13.2 | -0.274 | 0.362 | -- | -- | -- | 0.424 | 21.2 | -- | -- | -- | -- |
| 48.7 | 0.325 | 13.2 | -0.414 | -- | 0.426 | -- | -- | 0.328 | -- | 20.6 | 433 | -- | -- |
| 45.3 | 0.313 | 13.2 | -- | 0.379 | 0.363 | -- | -- | 0.415 | 21.6 | 19.34 | 170 | -- | -- |
| 54.5 | 0.345 | 13.2 | -0.273 | -- | -- | -- | -- | 0.423 | -- | -- | -- | -- | -- |
| 48.9 | 0.327 | 13.2 | -- | 0.362 | -- | -- | -- | 0.455 | 21.1 | -- | -- | -- | -- |
| 52.75 | 0.338 | 13.2 | -- | -- | 0.317 | -- | -- | 0.396 | -- | 20.6 | 354 | -- | -- |
| 56.46 | 0.351 | 13.2 | -- | -- | -- | -- | -- | 0.453 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 3 | 34.42 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 5 | 34.50 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 13 | 34.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 16 | 35.01 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 25 | 35.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 40 | 35.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 41 | 35.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 42 | 35.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 43 | 35.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 48 | 35.71 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 50 | 35.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 51 | 35.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 54 | 35.78 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 60 | 35.84 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 73 | 35.88 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 83 | 35.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 86 | 35.92 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 96 | 35.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 116 | 36.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 134 | 36.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 138 | 36.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 149 | 36.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 154 | 36.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 159 | 36.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 224 | 36.36 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 230 | 36.38 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 235 | 36.40 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 254 | 36.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 258 | 36.47 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 263 | 36.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 283 | 36.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 298 | 36.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 311 | 36.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 312 | 36.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 341 | 36.60 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 362 | 36.62 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 457 | 36.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 508 | 36.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 510 | 36.73 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 511 | 36.73 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 515 | 36.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 528 | 36.74 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 533 | 36.74 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 535 | 36.74 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 546 | 36.75 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 577 | 36.77 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 596 | 36.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 622 | 36.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 624 | 36.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 642 | 36.81 | wind | 7.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 658 | 36.82 | wind | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 660 | 36.82 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 675 | 36.83 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 682 | 36.83 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 693 | 36.84 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 753 | 36.86 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 7 |
| 798 | 36.89 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 944 | 36.96 | temperature | 15.0 | 14400 | > th | dose dependent | sin | 23 | NA |