Os10g0108100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os10g0108100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.26 | 0.53 | 7.46 | -1.13 | 0.405 | -1.79 | -0.315 | -1.58 | 0.413 | 13.4 | 10.35 | 708 | -- | -- |
| 129.08 | 0.529 | 7.43 | -0.855 | 0.42 | -1.8 | -0.172 | -- | 0.484 | 13.3 | 12.16 | 688 | -- | -- |
| 127.52 | 0.526 | 7.45 | -1.11 | 0.459 | -1.81 | -- | -1.41 | 0.422 | 13.6 | 8.492 | 650 | -- | -- |
| 128.76 | 0.529 | 7.43 | -0.883 | 0.525 | -1.72 | -- | -- | 0.48 | 13.8 | 16.34 | 584 | -- | -- |
| 134.55 | 0.54 | 7.45 | -1.06 | -- | -1.95 | -- | -1.39 | 0.444 | -- | 5.157 | 843 | -- | -- |
| 169.9 | 0.611 | 7.47 | -1.32 | 0.673 | -- | 0.189 | -- | 0.207 | 10.7 | -- | -- | -- | -- |
| 170.04 | 0.611 | 7.47 | -1.31 | 0.671 | -- | -- | -- | 0.208 | 10.7 | -- | -- | -- | -- |
| 135.83 | 0.543 | 7.42 | -0.798 | -- | -1.76 | -- | -- | 0.509 | -- | 17.02 | 861 | -- | -- |
| 146.35 | 0.563 | 7.39 | -- | 0.449 | -2.2 | -- | -- | 0.631 | 14 | 13.46 | 670 | -- | -- |
| 197.9 | 0.657 | 7.49 | -1.32 | -- | -- | -- | -- | 0.204 | -- | -- | -- | -- | -- |
| 215.2 | 0.686 | 7.44 | -- | 0.682 | -- | -- | -- | 0.354 | 10.9 | -- | -- | -- | -- |
| 150.79 | 0.572 | 7.39 | -- | -- | -2.25 | -- | -- | 0.644 | -- | 15.02 | 871 | -- | -- |
| 244.02 | 0.729 | 7.46 | -- | -- | -- | -- | -- | 0.351 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.34 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 3 | 122.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 7 | 123.36 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 20 | 124.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 21 | 124.19 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 14 |
| 32 | 124.39 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 36 | 124.45 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 43 | 124.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 44 | 124.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 51 | 124.80 | temperature | 25 | 4320 | < th | dose independent | sin | 8 | NA |
| 62 | 124.92 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 87 | 125.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 88 | 125.28 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 8 |
| 94 | 125.33 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 4 |
| 95 | 125.34 | temperature | 25 | 4320 | > th | dose independent | sin | 8 | NA |
| 96 | 125.34 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 111 | 125.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 134 | 125.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 138 | 125.62 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 2 |
| 157 | 125.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 163 | 125.73 | temperature | 25 | 4320 | > th | dose dependent | sin | 9 | NA |
| 204 | 125.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 246 | 126.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 252 | 126.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 254 | 126.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 269 | 126.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 284 | 126.30 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 332 | 126.54 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 369 | 126.68 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 12 |
| 373 | 126.69 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 377 | 126.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 389 | 126.73 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 9 |
| 394 | 126.75 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 9 |
| 411 | 126.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 445 | 126.85 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 450 | 126.87 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 456 | 126.88 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 461 | 126.90 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 8 |
| 465 | 126.91 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 2 |
| 513 | 127.00 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 575 | 127.09 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 4 |
| 595 | 127.12 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 4 |
| 613 | 127.14 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 657 | 127.20 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 670 | 127.21 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 716 | 127.27 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 16 |
| 720 | 127.28 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 778 | 127.36 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 813 | 127.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 844 | 127.43 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 861 | 127.46 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 872 | 127.48 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 904 | 127.53 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 973 | 127.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |