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Os10g0103700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to HD-ZIP protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0238) R2 : 0.524
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.22 (0.0577) R2dC : 0.47 R2C : 0.451
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.367 (0.0499) R2dN8 : 0.073 R2N8 : 0.0539
σ : 0.448
deviance : 91.56
__
_____
C
peak time of C : 22.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.81 0.417 11.8 0.725 1.13 -0.604 -1.12 -4.17 0.489 22 1.039 8424 -- --
85.72 0.435 11.9 0.0366 0.793 0.504 -0.697 -- 0.375 20.8 17.77 23063 -- --
78.27 0.412 11.8 0.66 1.22 -0.644 -- -3.7 0.457 21.9 0.001255 11644 -- --
86.94 0.437 11.9 0.0546 0.963 0.578 -- -- 0.371 21.4 121 47520 -- --
121.97 0.517 11.8 0.124 -- 0.729 -- -0.521 0.426 -- 0.001255 11644 -- --
90.29 0.445 11.9 0.0265 1.22 -- -0.555 -- 0.372 22 -- -- -- --
91.5 0.448 11.9 0.0478 1.22 -- -- -- 0.373 22.1 -- -- -- --
121.06 0.515 11.9 0.0481 -- 1.35 -- -- 0.358 -- 172.7 47520 -- --
86.62 0.436 11.9 -- 0.95 0.606 -- -- 0.365 21.3 160.7 47520 -- --
181.29 0.629 11.9 0.0635 -- -- -- -- 0.374 -- -- -- -- --
91.56 0.448 11.9 -- 1.22 -- -- -- 0.367 22.1 -- -- -- --
120.31 0.513 11.9 -- -- 1.36 -- -- 0.355 -- 205.8 47520 -- --
181.4 0.629 11.9 -- -- -- -- -- 0.367 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 72.31 radiation 20.0 30 < th dose dependent rect. 6 14
5 73.29 temperature 20.0 10 > th dose independent rect. 9 21
13 74.33 temperature 20.0 30 > th dose independent rect. 20 21
14 74.57 humidity 80.0 10 > th dose independent rect. 6 14
18 74.67 humidity 90.0 14400 > th dose dependent rect. 12 3
19 74.69 radiation 10.0 10 < th dose independent rect. 6 14
20 74.72 radiation 10.0 30 < th dose dependent rect. 20 10
21 74.73 temperature 20.0 10 > th dose independent rect. 9 8
23 74.80 temperature 10.0 90 > th dose dependent rect. 20 9
28 74.94 wind 1.0 90 > th dose independent rect. 5 15
32 75.06 temperature 20.0 10 > th dose independent rect. 11 17
34 75.10 temperature 20.0 30 > th dose independent rect. 20 19
36 75.13 humidity 70.0 10 > th dose dependent rect. 6 14
41 75.21 radiation 1.0 90 < th dose independent rect. 20 10
42 75.24 temperature 20.0 10 > th dose independent rect. 9 17
44 75.25 radiation 10.0 30 > th dose independent rect. 9 8
48 75.39 radiation 10.0 10 < th dose independent rect. 20 10
57 75.60 temperature 20.0 10 > th dose independent rect. 11 15
60 75.61 humidity 80.0 10 > th dose independent rect. 6 12
69 75.71 humidity 80.0 10 < th dose independent rect. 9 8
70 75.72 radiation 30.0 43200 < th dose independent rect. 17 4
76 75.74 temperature 10.0 90 > th dose independent rect. 20 9
77 75.74 temperature 30.0 90 < th dose independent rect. 20 9
78 75.74 humidity 50.0 90 > th dose independent rect. 20 9
81 75.74 atmosphere 995.0 90 > th dose independent rect. 20 9
85 75.74 temperature 10.0 90 > th dose independent rect. 5 15
86 75.74 atmosphere 1015.0 90 < th dose independent rect. 5 15
92 75.78 humidity 90.0 14400 > th dose independent rect. 12 3
109 75.79 humidity 80.0 270 > th dose independent rect. 2 15
112 75.84 wind 9.0 90 < th dose independent rect. 20 9
114 75.84 radiation 30.0 10 < th dose dependent rect. 6 5
119 75.94 wind 1.0 270 > th dose independent rect. 3 15
136 76.11 atmosphere 995.0 14400 > th dose independent rect. 7 1
139 76.13 temperature 15.0 270 > th dose independent rect. 7 8
140 76.14 humidity 90.0 14400 < th dose independent rect. 12 2
143 76.17 precipitation 0.1 90 < th dose independent rect. 20 9
146 76.17 precipitation 0.1 90 < th dose dependent rect. 20 9
149 76.23 precipitation 0.1 90 < th dose independent rect. 5 15
151 76.23 precipitation 0.1 90 < th dose dependent rect. 5 15
152 76.24 wind 7.0 43200 < th dose dependent rect. 18 1
154 76.26 temperature 10.0 10 > th dose independent rect. 20 10
155 76.26 temperature 30.0 10 < th dose independent rect. 20 10
156 76.26 humidity 50.0 10 > th dose independent rect. 20 10
159 76.26 atmosphere 995.0 10 > th dose independent rect. 20 10
163 76.26 temperature 10.0 10 > th dose independent rect. 6 14
165 76.26 atmosphere 1015.0 10 < th dose independent rect. 6 14
168 76.28 wind 3.0 43200 > th dose independent rect. 17 1
169 76.31 radiation 1.0 90 < th dose dependent rect. 20 17
173 76.34 wind 9.0 10 < th dose independent rect. 20 10
175 76.34 radiation 1.0 90 < th dose dependent rect. 20 14
180 76.37 atmosphere 995.0 90 > th dose independent rect. 5 15
188 76.41 wind 3.0 43200 < th dose independent rect. 17 1
191 76.43 wind 1.0 43200 > th dose dependent rect. 18 1
192 76.44 humidity 70.0 270 > th dose independent rect. 18 9
197 76.47 humidity 80.0 43200 < th dose independent rect. 22 18
198 76.49 temperature 30.0 270 < th dose independent rect. 18 9
199 76.49 radiation 1.0 270 < th dose independent rect. 18 9
200 76.50 precipitation 0.1 10 < th dose independent rect. 6 14
201 76.50 wind 9.0 90 < th dose independent rect. 5 15
203 76.50 precipitation 0.1 10 < th dose dependent rect. 6 14
208 76.52 temperature 20.0 43200 < th dose dependent rect. 6 2
210 76.53 radiation 1.0 90 < th dose independent rect. 20 17
215 76.54 humidity 70.0 10 > th dose dependent rect. 6 12
217 76.55 humidity 80.0 270 > th dose independent rect. 2 10
230 76.59 humidity 50.0 43200 > th dose dependent rect. 22 1
233 76.61 humidity 80.0 10 < th dose independent rect. 9 6
238 76.63 humidity 50.0 43200 > th dose dependent rect. 21 3
241 76.64 temperature 20.0 43200 < th dose dependent rect. 5 5
242 76.65 wind 1.0 270 > th dose independent rect. 3 4
245 76.65 humidity 50.0 43200 > th dose dependent rect. 20 5
258 76.70 temperature 10.0 1440 > th dose independent rect. 21 9
261 76.70 temperature 30.0 1440 < th dose independent rect. 21 9
265 76.70 humidity 50.0 1440 > th dose independent rect. 21 9
271 76.70 atmosphere 995.0 1440 > th dose independent rect. 21 9
272 76.70 radiation 20.0 1440 < th dose independent rect. 21 9
281 76.70 temperature 10.0 1440 > th dose independent rect. 6 15
288 76.71 radiation 10.0 270 < th dose dependent rect. 18 9
315 76.74 humidity 50.0 90 > th dose dependent rect. 20 9
318 76.75 precipitation 0.1 43200 < th dose independent rect. 6 2
319 76.75 precipitation 0.1 43200 < th dose dependent rect. 6 2
323 76.75 temperature 20.0 43200 < th dose dependent rect. 4 16
324 76.76 radiation 20.0 90 < th dose independent rect. 5 4
326 76.76 temperature 20.0 43200 < th dose dependent sin 2 NA
344 76.78 wind 1.0 43200 < th dose independent rect. 12 10
398 76.81 wind 1.0 43200 > th dose independent rect. 12 10
400 76.81 humidity 80.0 43200 > th dose independent rect. 22 19
402 76.81 temperature 20.0 43200 < th dose dependent no NA NA
412 76.81 temperature 20.0 43200 < th dose dependent rect. 16 20
418 76.81 temperature 20.0 43200 < th dose dependent rect. 10 22
445 76.82 temperature 10.0 270 > th dose dependent rect. 3 4
453 76.82 humidity 60.0 43200 > th dose dependent rect. 22 17
454 76.82 temperature 20.0 43200 < th dose dependent rect. 16 18
458 76.82 temperature 20.0 43200 < th dose dependent rect. 13 19
493 76.83 temperature 20.0 43200 < th dose dependent rect. 16 16
501 76.83 temperature 20.0 43200 < th dose dependent rect. 22 17
543 76.85 precipitation 0.1 43200 > th dose independent rect. 6 1
545 76.85 precipitation 0.1 43200 > th dose dependent rect. 6 1
563 76.86 humidity 80.0 43200 > th dose independent rect. 23 17
640 76.91 radiation 1.0 270 > th dose independent rect. 7 8
642 76.91 temperature 20.0 43200 < th dose dependent rect. 19 1
646 76.91 temperature 20.0 43200 < th dose dependent rect. 18 9
688 76.94 atmosphere 995.0 10 > th dose independent rect. 6 14
721 76.98 radiation 20.0 43200 < th dose independent rect. 17 8
722 76.98 temperature 10.0 270 > th dose independent rect. 18 9
727 76.98 temperature 10.0 270 > th dose independent rect. 3 15
728 76.98 atmosphere 1015.0 270 < th dose independent rect. 3 15
734 76.99 atmosphere 995.0 270 > th dose independent rect. 18 9
738 76.99 radiation 30.0 90 < th dose dependent rect. 5 5
745 77.00 wind 5.0 270 < th dose independent rect. 3 4
746 77.00 humidity 90.0 14400 < th dose independent rect. 11 4
747 77.00 radiation 20.0 10 < th dose independent rect. 6 4
751 77.00 temperature 20.0 43200 < th dose dependent rect. 24 1
753 77.00 temperature 20.0 43200 < th dose dependent rect. 22 3
765 77.01 radiation 40.0 43200 < th dose independent rect. 6 2
809 77.03 temperature 20.0 43200 < th dose dependent rect. 22 1
819 77.04 wind 1.0 43200 > th dose independent rect. 10 9
820 77.04 temperature 20.0 43200 < th dose dependent rect. 2 1
851 77.07 radiation 1.0 43200 > th dose independent rect. 7 4
860 77.08 temperature 20.0 43200 < th dose independent rect. 11 8
861 77.08 temperature 20.0 43200 < th dose independent rect. 7 9
862 77.08 radiation 40.0 43200 < th dose independent rect. 18 14
868 77.08 radiation 1.0 14400 < th dose dependent rect. 9 8
870 77.09 radiation 1.0 14400 > th dose independent rect. 7 9
887 77.10 wind 3.0 43200 < th dose dependent rect. 14 5
892 77.11 radiation 1.0 43200 < th dose independent rect. 7 4
893 77.11 radiation 1.0 14400 < th dose independent rect. 9 7
895 77.11 radiation 1.0 14400 < th dose independent rect. 7 9
901 77.11 humidity 50.0 10 > th dose dependent rect. 20 10
902 77.12 temperature 20.0 43200 > th dose independent rect. 11 3
914 77.13 temperature 20.0 43200 < th dose independent rect. 11 3
915 77.13 temperature 20.0 43200 > th dose independent rect. 11 8
916 77.13 wind 9.0 270 < th dose independent rect. 18 9
917 77.13 temperature 20.0 43200 > th dose independent rect. 7 9
918 77.13 humidity 80.0 10 > th dose independent rect. 6 10
946 77.16 precipitation 0.1 43200 > th dose independent rect. 5 3
949 77.16 radiation 40.0 43200 < th dose independent rect. 24 8
955 77.16 precipitation 0.1 270 < th dose independent rect. 3 15
962 77.16 radiation 1.0 14400 < th dose dependent rect. 6 11
963 77.16 precipitation 0.1 270 < th dose dependent rect. 3 15
973 77.18 temperature 20.0 43200 > th dose independent rect. 12 1
978 77.18 temperature 20.0 43200 > th dose independent rect. 7 12
980 77.18 radiation 1.0 43200 < th dose dependent rect. 7 3