Os10g0102400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0102400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.55 | 0.237 | 9.91 | 1.57 | 0.554 | -0.756 | 0.0744 | 2.73 | 0.579 | 22.8 | 21.75 | 725 | -- | -- |
| 29.08 | 0.251 | 9.94 | 1.22 | 0.429 | -0.55 | 0.331 | -- | 0.597 | 0.128 | 20.56 | 14267 | -- | -- |
| 25.57 | 0.236 | 9.91 | 1.58 | 0.552 | -0.753 | -- | 2.76 | 0.583 | 22.9 | 21.64 | 731 | -- | -- |
| 28.73 | 0.25 | 9.93 | 1.38 | 0.43 | -0.759 | -- | -- | 0.614 | 0.106 | 12.57 | 14122 | -- | -- |
| 34.87 | 0.277 | 9.94 | 1.19 | -- | -0.724 | -- | 1.43 | 0.488 | -- | 21.64 | 731 | -- | -- |
| 36.01 | 0.281 | 10 | 0.836 | 0.406 | -- | 0.297 | -- | 0.314 | 24 | -- | -- | -- | -- |
| 36.38 | 0.282 | 10 | 0.824 | 0.405 | -- | -- | -- | 0.312 | 0.157 | -- | -- | -- | -- |
| 36.57 | 0.283 | 9.96 | 0.99 | -- | -0.837 | -- | -- | 0.43 | -- | 11.3 | 7469 | -- | -- |
| 52.32 | 0.337 | 10 | -- | 0.451 | -0.207 | -- | -- | 0.184 | 0.136 | 33.77 | 987 | -- | -- |
| 46.69 | 0.319 | 9.99 | 0.837 | -- | -- | -- | -- | 0.318 | -- | -- | -- | -- | -- |
| 54.28 | 0.345 | 10 | -- | 0.416 | -- | -- | -- | 0.22 | 0.266 | -- | -- | -- | -- |
| 60.93 | 0.365 | 10 | -- | -- | -0.527 | -- | -- | 0.285 | -- | 11.3 | 7469 | -- | -- |
| 65.18 | 0.377 | 10 | -- | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 2 | 24.31 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 3 | 24.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 4 | 24.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 5 | 24.36 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 6 | 24.36 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 10 | 24.37 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 16 | 24.51 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 17 | 24.52 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 27 | 24.56 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 28 | 24.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 29 | 24.59 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 30 | 24.59 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 34 | 24.64 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 36 | 24.65 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 39 | 24.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 41 | 24.68 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 44 | 24.72 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 46 | 24.72 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 63 | 24.82 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 86 | 24.92 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 103 | 24.95 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 104 | 24.96 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 125 | 25.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 135 | 25.02 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 138 | 25.03 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 158 | 25.06 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 169 | 25.11 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 173 | 25.12 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 189 | 25.14 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 192 | 25.14 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 196 | 25.15 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 212 | 25.16 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 241 | 25.23 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 258 | 25.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 260 | 25.27 | humidity | 90.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 307 | 25.33 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 7 |
| 327 | 25.36 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 366 | 25.40 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 424 | 25.47 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 511 | 25.54 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 518 | 25.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 520 | 25.55 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 532 | 25.56 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 561 | 25.58 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 568 | 25.59 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 578 | 25.60 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 679 | 25.66 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 761 | 25.71 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 762 | 25.72 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 777 | 25.73 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 825 | 25.75 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 831 | 25.76 | humidity | 90.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 839 | 25.76 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 849 | 25.76 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 869 | 25.78 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 873 | 25.78 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 915 | 25.80 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 927 | 25.81 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 932 | 25.81 | wind | 3.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 947 | 25.82 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 952 | 25.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 5 |