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Os09g0572200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.4 (0.0112) R2 : 0.0198
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0714 (0.0235) R2dN8 : 0.0255 R2N8 : 0.0198
σ : 0.211
deviance : 20.35
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.19 0.157 9.42 -0.000549 0.763 0.671 -0.165 0.889 -0.0506 20 2.169 873 -- --
11.42 0.157 9.41 0.0263 0.765 0.679 -0.698 -- -0.0388 19.9 2.54 864 -- --
11.21 0.156 9.42 -0.00436 0.765 0.675 -- 1.1 -0.0536 20 2.019 873 -- --
12.84 0.167 9.41 0.0439 0.761 0.675 -- -- -0.0392 20 2.436 870 -- --
15.91 0.187 9.39 -0.000769 -- 0.192 -- -0.277 -0.067 -- 2.019 873 -- --
12.76 0.167 9.4 -0.0269 0.332 -- -0.575 -- -0.0706 21.1 -- -- -- --
13.77 0.174 9.4 -0.00886 0.333 -- -- -- -0.0715 21.7 -- -- -- --
16.4 0.189 9.39 -0.0032 -- 0.191 -- -- -0.0682 -- 2.019 873 -- --
12.89 0.167 9.41 -- 0.753 0.661 -- -- -0.0458 20.1 2.56 870 -- --
20.35 0.211 9.4 -0.00586 -- -- -- -- -0.072 -- -- -- -- --
13.78 0.174 9.4 -- 0.333 -- -- -- -0.0705 21.7 -- -- -- --
16.4 0.189 9.39 -- -- 0.191 -- -- -0.0678 -- 2.019 873 -- --
20.35 0.211 9.4 -- -- -- -- -- -0.0714 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.58 radiation 1.0 720 < th dose independent rect. 17 7
2 10.69 temperature 30.0 720 < th dose independent rect. 18 6
3 10.72 radiation 10.0 720 < th dose dependent rect. 21 9
4 10.73 radiation 1.0 720 < th dose dependent rect. 17 7
5 10.74 temperature 30.0 720 < th dose independent rect. 12 3
8 10.78 temperature 30.0 10 < th dose independent rect. 2 11
9 10.78 temperature 30.0 720 < th dose independent rect. 18 15
10 10.78 radiation 30.0 720 < th dose independent rect. 18 15
14 10.82 radiation 1.0 720 < th dose independent rect. 11 13
15 10.82 temperature 30.0 30 < th dose independent rect. 12 14
20 10.84 radiation 1.0 270 < th dose independent rect. 3 21
23 10.85 radiation 10.0 720 < th dose dependent rect. 15 9
27 10.86 radiation 1.0 270 < th dose dependent rect. 3 21
28 10.87 wind 1.0 720 > th dose independent rect. 3 12
29 10.87 humidity 50.0 10 > th dose independent rect. 12 14
31 10.88 humidity 70.0 4320 > th dose independent rect. 22 5
37 10.88 radiation 10.0 720 < th dose dependent rect. 11 13
41 10.89 temperature 30.0 720 < th dose independent rect. 21 18
45 10.90 radiation 1.0 720 > th dose independent rect. 15 21
49 10.91 radiation 10.0 720 < th dose independent rect. 21 9
52 10.92 humidity 50.0 270 > th dose independent rect. 12 12
56 10.92 humidity 50.0 10 > th dose dependent rect. 14 12
61 10.93 radiation 1.0 720 > th dose independent rect. 9 10
65 10.93 temperature 30.0 270 < th dose independent rect. 12 12
89 10.94 humidity 70.0 720 > th dose independent rect. 19 5
90 10.94 temperature 30.0 720 < th dose independent rect. 3 12
92 10.94 humidity 60.0 720 > th dose independent rect. 18 15
98 10.96 radiation 20.0 10 < th dose independent rect. 21 12
99 10.96 atmosphere 1015.0 10 < th dose independent rect. 12 14
101 10.96 wind 9.0 720 < th dose dependent rect. 21 1
104 10.97 precipitation 0.1 10 < th dose independent rect. 12 14
109 10.97 precipitation 0.1 10 < th dose dependent rect. 12 14
112 10.98 wind 9.0 720 < th dose independent rect. 12 3
117 10.99 temperature 10.0 10 > th dose independent rect. 2 10
119 10.99 atmosphere 995.0 10 > th dose independent rect. 2 10
120 10.99 atmosphere 1015.0 10 < th dose independent rect. 2 10
122 10.99 temperature 10.0 10 > th dose independent rect. 12 14
129 11.00 temperature 25.0 720 < th dose independent rect. 23 1
130 11.00 wind 3.0 720 < th dose independent rect. 19 3
133 11.00 precipitation 0.1 10 < th dose independent rect. 2 10
136 11.00 wind 9.0 720 < th dose dependent rect. 24 3
137 11.00 precipitation 0.1 10 < th dose dependent rect. 2 10
147 11.01 atmosphere 995.0 10 > th dose independent rect. 12 14
158 11.02 wind 9.0 30 < th dose independent rect. 12 14
160 11.02 temperature 30.0 720 < th dose independent rect. 3 20
161 11.02 temperature 30.0 720 < th dose dependent rect. 21 1
164 11.03 temperature 10.0 1440 > th dose independent rect. 3 10
167 11.03 atmosphere 995.0 1440 > th dose independent rect. 3 10
169 11.03 temperature 10.0 1440 > th dose independent rect. 13 14
177 11.04 temperature 25.0 720 < th dose independent rect. 21 3
179 11.04 radiation 20.0 90 < th dose independent rect. 21 12
184 11.04 humidity 50.0 720 > th dose dependent rect. 21 1
188 11.05 temperature 10.0 720 > th dose independent rect. 12 3
189 11.05 atmosphere 1015.0 720 < th dose independent rect. 12 3
190 11.05 precipitation 0.1 720 < th dose independent rect. 24 3
193 11.05 wind 9.0 720 < th dose independent rect. 21 9
194 11.05 temperature 10.0 720 > th dose independent rect. 9 9
195 11.05 atmosphere 1015.0 720 < th dose independent rect. 9 9
196 11.05 wind 9.0 10 < th dose independent rect. 2 10
203 11.05 wind 9.0 720 < th dose independent rect. 18 15
204 11.05 temperature 10.0 720 > th dose independent rect. 18 15
206 11.05 temperature 10.0 720 > th dose independent rect. 15 21
210 11.05 precipitation 0.1 720 < th dose dependent rect. 24 3
216 11.06 wind 9.0 720 < th dose independent rect. 24 3
217 11.06 temperature 10.0 720 > th dose independent rect. 24 3
218 11.06 temperature 30.0 720 < th dose independent rect. 24 3
219 11.06 humidity 50.0 720 > th dose independent rect. 24 3
222 11.06 atmosphere 995.0 720 > th dose independent rect. 24 3
223 11.06 radiation 1.0 720 < th dose independent rect. 24 3
228 11.06 precipitation 0.1 720 < th dose independent rect. 12 3
229 11.06 wind 9.0 720 < th dose independent rect. 18 6
230 11.06 temperature 10.0 720 > th dose independent rect. 6 6
231 11.06 temperature 10.0 720 > th dose independent rect. 18 6
233 11.06 atmosphere 995.0 720 > th dose independent rect. 6 6
234 11.06 atmosphere 1015.0 720 < th dose independent rect. 6 6
235 11.06 radiation 20.0 720 < th dose independent rect. 18 6
238 11.06 temperature 10.0 720 > th dose independent rect. 21 9
239 11.06 temperature 30.0 720 < th dose independent rect. 21 9
240 11.06 humidity 50.0 720 > th dose independent rect. 21 9
243 11.06 atmosphere 995.0 720 > th dose independent rect. 21 9
248 11.06 temperature 10.0 720 > th dose independent rect. 6 15
249 11.06 temperature 10.0 720 > th dose independent rect. 12 18
250 11.06 temperature 10.0 720 > th dose independent rect. 24 18
251 11.06 wind 1.0 720 > th dose independent rect. 3 21
252 11.06 temperature 10.0 720 > th dose independent rect. 3 21
253 11.06 radiation 1.0 720 < th dose dependent rect. 24 3
258 11.06 precipitation 0.1 720 < th dose dependent rect. 12 3
266 11.07 precipitation 0.1 720 < th dose independent rect. 9 9
270 11.07 humidity 50.0 720 > th dose independent rect. 3 21
273 11.07 precipitation 0.1 720 < th dose dependent rect. 9 9
278 11.08 precipitation 0.1 720 < th dose independent rect. 6 6
282 11.08 precipitation 0.1 720 < th dose dependent rect. 6 6
286 11.09 precipitation 0.1 720 < th dose independent rect. 18 6
288 11.09 wind 9.0 720 < th dose independent rect. 5 10
291 11.09 humidity 70.0 720 > th dose independent rect. 13 11
296 11.09 radiation 40.0 720 < th dose independent rect. 15 14
302 11.09 precipitation 0.1 720 < th dose independent rect. 3 21
303 11.09 precipitation 0.1 720 < th dose dependent rect. 18 6
307 11.09 humidity 50.0 270 > th dose dependent rect. 12 12
309 11.09 precipitation 0.1 720 < th dose dependent rect. 3 21
313 11.10 humidity 50.0 720 > th dose independent rect. 6 6
314 11.10 atmosphere 995.0 720 > th dose independent rect. 18 6
318 11.10 wind 9.0 720 < th dose independent rect. 3 12
321 11.10 humidity 70.0 90 > th dose independent rect. 21 12
324 11.10 wind 1.0 10 > th dose independent rect. 12 14
328 11.10 radiation 20.0 720 < th dose independent rect. 14 18
329 11.10 atmosphere 995.0 720 > th dose independent rect. 15 21
331 11.10 wind 9.0 720 < th dose dependent rect. 19 5
332 11.10 humidity 50.0 270 > th dose dependent rect. 14 10
338 11.10 radiation 40.0 720 < th dose dependent rect. 12 20
344 11.11 atmosphere 1015.0 720 < th dose independent rect. 19 5
347 11.11 humidity 60.0 720 > th dose independent rect. 4 9
352 11.11 radiation 40.0 720 < th dose independent rect. 15 12
353 11.11 wind 9.0 270 < th dose independent rect. 11 13
368 11.11 atmosphere 1015.0 10 < th dose dependent rect. 12 14
385 11.12 humidity 50.0 30 > th dose independent rect. 2 10
391 11.12 atmosphere 1015.0 90 < th dose independent rect. 21 12
398 11.12 humidity 50.0 720 > th dose independent rect. 3 14
407 11.12 wind 9.0 720 < th dose independent rect. 12 18
413 11.12 temperature 20.0 90 > th dose independent rect. 1 20
428 11.12 temperature 10.0 30 > th dose dependent rect. 2 19
430 11.13 humidity 50.0 720 > th dose independent rect. 12 3
431 11.13 atmosphere 995.0 720 > th dose independent rect. 12 3
440 11.13 wind 7.0 90 < th dose independent rect. 21 12
441 11.13 atmosphere 1015.0 720 < th dose independent rect. 12 12
468 11.14 temperature 10.0 90 > th dose independent rect. 9 12
469 11.14 temperature 10.0 90 > th dose independent rect. 21 12
470 11.14 humidity 50.0 90 > th dose independent rect. 21 12
472 11.14 atmosphere 995.0 90 > th dose independent rect. 21 12
473 11.14 atmosphere 1015.0 90 < th dose independent rect. 9 12
481 11.14 precipitation 0.1 720 < th dose independent rect. 24 18
490 11.14 precipitation 0.1 720 < th dose dependent rect. 24 18
496 11.15 wind 1.0 720 > th dose independent rect. 12 3
500 11.15 wind 3.0 720 < th dose independent rect. 14 9
504 11.15 temperature 30.0 90 < th dose independent rect. 21 12
507 11.15 precipitation 0.1 720 < th dose independent rect. 3 12
519 11.15 atmosphere 1015.0 720 < th dose independent rect. 4 20
520 11.15 wind 9.0 720 < th dose independent rect. 3 21
522 11.15 atmosphere 1015.0 720 < th dose dependent rect. 12 3
528 11.15 precipitation 0.1 720 < th dose dependent rect. 3 12
533 11.16 atmosphere 1015.0 720 < th dose independent rect. 21 1
534 11.16 precipitation 0.1 720 < th dose independent rect. 21 1
540 11.16 wind 9.0 720 < th dose independent rect. 6 6
551 11.16 humidity 70.0 270 > th dose independent rect. 19 12
553 11.16 precipitation 0.1 90 < th dose independent rect. 21 12
555 11.16 precipitation 0.1 720 < th dose independent rect. 3 14
563 11.16 precipitation 0.1 720 < th dose dependent rect. 21 1
576 11.16 precipitation 0.1 90 < th dose dependent rect. 21 12
581 11.16 radiation 40.0 10 < th dose dependent rect. 12 14
582 11.16 precipitation 0.1 720 < th dose dependent rect. 3 14
586 11.17 wind 9.0 720 < th dose independent rect. 21 1
600 11.17 humidity 50.0 720 > th dose independent rect. 12 5
604 11.17 precipitation 0.1 720 < th dose independent rect. 5 10
606 11.17 temperature 10.0 270 > th dose independent rect. 24 11
609 11.17 atmosphere 995.0 270 > th dose independent rect. 24 11
610 11.17 atmosphere 1015.0 270 < th dose independent rect. 24 11
612 11.17 temperature 10.0 1440 > th dose independent rect. 10 12
615 11.17 temperature 10.0 1440 > th dose independent rect. 22 12
620 11.17 atmosphere 995.0 1440 > th dose independent rect. 22 12
622 11.17 precipitation 0.1 90 < th dose independent rect. 9 12
623 11.17 temperature 10.0 270 > th dose independent rect. 11 13
627 11.17 humidity 50.0 720 > th dose independent rect. 12 18
628 11.17 atmosphere 995.0 720 > th dose independent rect. 24 18
629 11.17 precipitation 0.1 720 < th dose independent rect. 12 18
636 11.17 precipitation 0.1 720 < th dose independent rect. 15 21
640 11.17 temperature 30.0 720 < th dose dependent rect. 19 4
647 11.17 precipitation 0.1 720 < th dose dependent rect. 5 10
649 11.17 temperature 30.0 90 < th dose dependent rect. 21 12
651 11.17 precipitation 0.1 90 < th dose dependent rect. 9 12
658 11.17 precipitation 0.1 720 < th dose dependent rect. 12 18
663 11.17 precipitation 0.1 720 < th dose dependent rect. 15 21
664 11.18 temperature 10.0 720 > th dose independent rect. 9 1
665 11.18 temperature 10.0 720 > th dose independent rect. 21 1
666 11.18 temperature 30.0 720 < th dose independent rect. 21 1
667 11.18 humidity 50.0 720 > th dose independent rect. 9 1
668 11.18 humidity 50.0 720 > th dose independent rect. 21 1
671 11.18 atmosphere 995.0 720 > th dose independent rect. 9 1
672 11.18 atmosphere 995.0 720 > th dose independent rect. 21 1
673 11.18 atmosphere 1015.0 720 < th dose independent rect. 9 1
674 11.18 radiation 1.0 720 < th dose independent rect. 21 1
679 11.18 precipitation 0.1 720 < th dose independent rect. 9 1
685 11.18 atmosphere 995.0 720 > th dose independent rect. 17 10
690 11.18 humidity 50.0 270 > th dose independent rect. 24 11
694 11.18 wind 1.0 90 > th dose independent rect. 9 12
713 11.18 temperature 10.0 720 > th dose independent rect. 10 23
714 11.18 temperature 10.0 720 > th dose independent rect. 22 23
716 11.18 radiation 1.0 720 < th dose dependent rect. 21 1
721 11.18 precipitation 0.1 720 < th dose dependent rect. 9 1
723 11.18 wind 3.0 720 < th dose dependent rect. 18 4
728 11.18 humidity 50.0 720 > th dose dependent rect. 19 5
744 11.19 temperature 25.0 270 < th dose independent sin 14 NA
755 11.19 temperature 10.0 720 > th dose independent rect. 5 10
757 11.19 atmosphere 1015.0 720 < th dose independent rect. 5 10
758 11.19 atmosphere 1015.0 720 < th dose independent rect. 12 10
762 11.19 precipitation 0.1 270 < th dose independent rect. 24 11
769 11.19 atmosphere 995.0 720 > th dose independent rect. 15 12
771 11.19 atmosphere 1015.0 720 < th dose independent rect. 3 12
777 11.19 temperature 10.0 720 > th dose independent rect. 15 14
785 11.19 atmosphere 1015.0 720 < th dose independent rect. 12 19
794 11.19 wind 3.0 720 < th dose dependent rect. 14 9
797 11.19 precipitation 0.1 270 < th dose dependent rect. 24 11
799 11.19 radiation 40.0 90 < th dose dependent rect. 21 12
810 11.20 wind 9.0 720 < th dose independent rect. 9 1
811 11.20 atmosphere 1015.0 720 < th dose independent rect. 21 3
816 11.20 wind 9.0 270 < th dose independent rect. 24 11
835 11.20 atmosphere 1015.0 720 < th dose independent rect. 3 14
865 11.20 radiation 40.0 10 < th dose dependent rect. 21 12
885 11.21 humidity 70.0 4320 > th dose independent rect. 22 3
893 11.21 temperature 10.0 720 > th dose independent rect. 17 10
896 11.21 precipitation 0.1 720 < th dose independent rect. 17 10
904 11.21 temperature 10.0 720 > th dose independent rect. 15 12
907 11.21 precipitation 0.1 720 < th dose independent rect. 15 12
916 11.21 temperature 10.0 720 > th dose independent rect. 3 14
917 11.21 radiation 40.0 90 < th dose independent rect. 21 14
931 11.21 precipitation 0.1 720 < th dose dependent rect. 17 10
934 11.21 precipitation 0.1 720 < th dose dependent rect. 15 12
948 11.21 radiation 1.0 30 < th dose dependent rect. 5 21
949 11.22 radiation 1.0 720 > th dose independent rect. 9 1
966 11.22 wind 7.0 270 < th dose independent rect. 19 12
978 11.22 radiation 40.0 270 < th dose independent rect. 12 12
983 11.22 temperature 30.0 720 < th dose independent rect. 3 16
986 11.22 humidity 70.0 720 > th dose independent rect. 13 17