BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0572200 Os09g0572200|AK072621
         (713 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60760.1  | chr5:24438465-24442004 FORWARD LENGTH=739          605   e-173
AT3G45090.1  | chr3:16490752-16494452 REVERSE LENGTH=718          601   e-172

>AT5G60760.1 | chr5:24438465-24442004 FORWARD LENGTH=739
          Length = 738

 Score =  605 bits (1559), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 337/652 (51%), Positives = 410/652 (62%), Gaps = 73/652 (11%)

Query: 11  KLLYIVVVD---------DDGA-----TFRYTRSLLHSTLQLMGCKPRHAFEISGRVFDE 56
           K++YIVVVD         +DG      +FRYTR +L STLQLMGCK RHAF+IS RVF+ 
Sbjct: 6   KVMYIVVVDGTDTAETVEEDGTGTWKDSFRYTRPVLQSTLQLMGCKARHAFKISRRVFEL 65

Query: 57  IRXXXXXXXXXXXXXXVQR---YELAADAEAAS------------------PRQFQFELY 95
           IR                +   ++   DA A +                   +   FE+Y
Sbjct: 66  IRSEGSLILSPSLSPSHSKESEFQKTGDASACANVEKANKVNSLATDDVDKSKSKPFEVY 125

Query: 96  KRRTTLLIPRPLFLRLVCHALALYKYVAPDQRSDLHRACRIRERKESVTILLCXXXXXXX 155
           KRRTT+++ R +F+ +VC ALA YKYV  DQR+DL  +CRIRERKESVT+LLC       
Sbjct: 126 KRRTTVVVSREIFVNVVCDALAEYKYVGHDQRADLILSCRIRERKESVTVLLCGTSGCGK 185

Query: 156 XXXXXXXXXXXXXXXVVSTDSIRHMMRSFVEEKQNPLLWASTYHAGECLDPVAVA----- 210
                          VVSTDSIRHMMRSFV+EKQNPLLWASTYHAGE LDPVAVA     
Sbjct: 186 STLSALLGSRLGITTVVSTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVAESKAR 245

Query: 211 -------DXXXXXXXXXXSGISTTSTIDFD----KTRPLNDKPDGKPIGKKQMAIEGYKA 259
                  D           G    +T   D    K  P+   P       KQMA+EG+KA
Sbjct: 246 RRRAKKMDSIEDEKAKASEGGKAKNTQQTDVGSTKNTPVLLSP-------KQMAVEGFKA 298

Query: 260 QSEMVIDSLDRLITAWEDRKESVVVEGVHLSLNFVMGLMRKHPSIIPFMIYISDEGKHTE 319
           QSEMVID+LDRLITAWE+RKESV+VEGVHLSLNFVMGLM+KHPSI+PFM+YI++E KH E
Sbjct: 299 QSEMVIDNLDRLITAWEERKESVIVEGVHLSLNFVMGLMKKHPSIVPFMVYIANEEKHLE 358

Query: 320 RFAVRAKYMTLDPTKNKYVKYISNIRTIQEYLCSRADKYLVPKVNNTNVDRSVASIHATV 379
           RFAVRAKYMTLDP KNKYVKYI NIRTIQ+YLC RADK+LVPK+NNTNVD+SVA+IHATV
Sbjct: 359 RFAVRAKYMTLDPEKNKYVKYIRNIRTIQDYLCKRADKHLVPKINNTNVDKSVAAIHATV 418

Query: 380 FSCLRRRAAGDQLYDPATNTVAVVNEEYKNQCVANSMSSKGMFKLIQRLGSSRKLMAIVN 439
           FSCLRRR AG+ LYD  TNTV+V+++EY+NQC ANS+SSKGMF+LIQR GSSR LMA++N
Sbjct: 419 FSCLRRREAGEHLYDATTNTVSVIDDEYRNQCTANSLSSKGMFQLIQRKGSSRHLMALLN 478

Query: 440 VDGSVSKAWPVEXXXXXXXX---XXXXXXXXYVGDPIYGPLNIGRAESVNLQFGAFGISA 496
            DG+ ++ WPV                     +  P+YG L   +AE VNLQFG FGISA
Sbjct: 479 TDGTFARTWPVTGKVDESGKPVFCNEMIEENGMEHPVYGYLQ--KAEPVNLQFGLFGISA 536

Query: 497 WPTDAGCTSQAGSVNESWDNANEGTGSHVPSSSGSPKKLDGHCKEIKXXXXXXXXXXXXX 556
           WP+D G TS+AGSV++   +  E +  +  S   SP+  +G  KE+K             
Sbjct: 537 WPSD-GATSRAGSVDDCKADMAETSSRYYSSCCSSPRMSEGTSKELKEDQSVHGSDEEVE 595

Query: 557 XXXXXXXVPPNSGSEEDLSEEDIRAIHEEMEGSVDEDCNRSDEEYDDLAMRD 608
                   PP   +  D S++D +  H+E+ GSVDE   +SDEEYDDLAM D
Sbjct: 596 DD------PPEPDT--DFSDDDNKRDHDEV-GSVDEQSTKSDEEYDDLAMED 638



>AT3G45090.1 | chr3:16490752-16494452 REVERSE LENGTH=718
          Length = 717

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 324/618 (52%), Positives = 396/618 (64%), Gaps = 32/618 (5%)

Query: 11  KLLYIVV-------VDDDGATFRYTRSLLHSTLQLMGCKPRHAFEISGRVFDEIRXXXXX 63
           K+LYIVV        ++   +FRYTR +L STLQLMGCK RHAF+IS RVF+ IR     
Sbjct: 7   KVLYIVVREEGDDDDNNGDDSFRYTRPVLQSTLQLMGCKARHAFKISRRVFELIRSEGSC 66

Query: 64  XXXXXX------------XXXVQRYE-LAADAEAASPRQFQFELYKRRTTLLIPRPLFLR 110
                                V++   L    +    +   FE+YKRRTT+++ R +F+ 
Sbjct: 67  NTSPENGKEPEFAKEVGGSTCVEKLNCLVVAGDVDKNKSKPFEMYKRRTTVVVSREIFVD 126

Query: 111 LVCHALALYKYVAPDQRSDLHRACRIRERKESVTILLCXXXXXXXXXXXXXXXXXXXXXX 170
           +VC ALA YKYV  DQR+DL  ACRIRERKESVT+LLC                      
Sbjct: 127 VVCDALAEYKYVGRDQRADLILACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITT 186

Query: 171 VVSTDSIRHMMRSFVEEKQNPLLWASTYHAGECLDPVAVADXXXXXXXXXXSGISTTSTI 230
           VVSTDSIRHMMRSF +EKQNPLLWASTYHAGE LDPVAVA+           G    ++ 
Sbjct: 187 VVSTDSIRHMMRSFADEKQNPLLWASTYHAGEYLDPVAVAESKAKRKAKKLKGSRGVNS- 245

Query: 231 DFDKTRPLNDKPDGKPIGKKQMAIEGYKAQSEMVIDSLDRLITAWEDRKESVVVEGVHLS 290
           +  KT   ++    + +  KQMAIEGYKAQSEMVIDSLDRLIT WE+R ESVVVEGVHLS
Sbjct: 246 NAQKTDAGSNSSTTELLSHKQMAIEGYKAQSEMVIDSLDRLITTWEERNESVVVEGVHLS 305

Query: 291 LNFVMGLMRKHPSIIPFMIYISDEGKHTERFAVRAKYMTLDPTKNKYVKYISNIRTIQEY 350
           LNFVMGLM+KHPSI+PFM+YI++E KH ERFAVRAKYMTLDP KNKYVKYI NIRTIQ+Y
Sbjct: 306 LNFVMGLMKKHPSIVPFMVYIANEEKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDY 365

Query: 351 LCSRADKYLVPKVNNTNVDRSVASIHATVFSCLRRRAAGDQLYDPATNTVAVVNEEYKNQ 410
           LC RADK+LVPK+NNTNVD+SVA+IHATVF CLRRR  G++LYD  TNTV+V+++E++NQ
Sbjct: 366 LCKRADKHLVPKINNTNVDKSVATIHATVFGCLRRRETGEKLYDTTTNTVSVIDDEHRNQ 425

Query: 411 CVANSMSSKGMFKLIQRLGSSRKLMAIVNVDGSVSKAWPVEXXXXXXXXXXXXXXXXYVG 470
           C ANS++SKGMF++IQR GSSR+ MA+ N DG+V+K WPV                    
Sbjct: 426 CAANSLTSKGMFQVIQRQGSSRRFMALCNTDGTVAKTWPVASVGKIRKPVVNTEMDDGTE 485

Query: 471 DPIYGPLNIGRAESVNLQFGAFGISAWPTDAGCTSQAGSVNESWDNANEGTGSHVPSSSG 530
             ++      +AE VNLQFG FGISAWP+D G TS AGSV++   +  E    H  S   
Sbjct: 486 HQLH------KAEPVNLQFGHFGISAWPSD-GATSHAGSVDDLRADIIETGSRHYSSCCS 538

Query: 531 SPKKLDGHCKEIKXXXXXXXXXXXXXXXXXXXXVPPNSGSEEDLSEEDIRAIHEEMEGSV 590
           SP+  DG  KE+                      P    S+EDLS+ +     +E+ GSV
Sbjct: 539 SPRTSDGPSKELMEEQSVNGSDEDDEEGDDDFHEPD---SDEDLSDNNDERNRDEI-GSV 594

Query: 591 DEDCNRSDEEYDDLAMRD 608
           DE+  +SDEEYDDLAM D
Sbjct: 595 DEESTKSDEEYDDLAMED 612



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.133    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,658,676
Number of extensions: 521877
Number of successful extensions: 1414
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1405
Number of HSP's successfully gapped: 5
Length of query: 713
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 607
Effective length of database: 8,200,473
Effective search space: 4977687111
Effective search space used: 4977687111
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)